RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 CYTH1Q15438 398 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 MYLK3Q32MK0 819 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 ARMCX6Q7L4S7 300 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 RABEPKQ7Z6M1 372 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 SYT12Q8IV01 421 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 SLC41A1Q8IVJ1 513 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 TP53INP2Q8IXH6 220 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 RCOR2Q8IZ40 523 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 BBS5Q8N3I7 341 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 RNF10Q8N5U6 811 aaKnown RBP17.58■□□□□ 0.4
CDK4-208ENST00000551706 PQLC3Q8N755 202 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 OR2T34Q8NGX1 318 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 ZNF830Q96NB3 372 aaPredicted RBP17.58■□□□□ 0.4
CDK4-208ENST00000551706 CINPQ9BW66 212 aaPredicted RBP17.58■□□□□ 0.4
CDK4-208ENST00000551706 ZDHHC6Q9H6R6 413 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 SEPT3Q9UH03 358 aa17.58■□□□□ 0.4
CDK4-208ENST00000551706 TPX2Q9ULW0 747 aaKnown RBP17.58■□□□□ 0.4
CDK4-208ENST00000551706 LNP1A1A4G5 178 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 MACROD2A1Z1Q3 448 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 MEI4A8MW99 385 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 KRIT1O00522 736 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 APOL1O14791 398 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 KRT86O43790 486 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 MAFKO60675 156 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 CCDC175P0C221 793 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 ITGB7P26010 798 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 CTNNA1P35221 906 aaKnown RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 HSPA9P38646 679 aaKnown RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 GARSP41250 739 aaKnown RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 RENBPP51606 427 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 ADPRHP54922 357 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 CNTN1Q12860 1018 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 TFDP2Q14188 446 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 ATXN7L2Q5T6C5 722 aaPredicted RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 SLC9A4Q6AI14 798 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 TIGD7Q6NT04 549 aaPredicted RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 ARHGAP36Q6ZRI8 547 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 DEFB119Q8N690 84 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 NETO2Q8NC67 525 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 OR14C36Q8NHC7 312 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 UBE2Q2Q8WVN8 375 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 PIGKQ92643 395 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 RNF25Q96BH1 459 aaPredicted RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 RBM41Q96IZ5 413 aaKnown RBP17.57■□□□□ 0.4
CDK4-208ENST00000551706 PSKH2Q96QS6 385 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 HDAC8Q9BY41 377 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 LHX3Q9UBR4 397 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 PILRBQ9UKJ0 227 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 NEUROG3Q9Y4Z2 214 aa17.57■□□□□ 0.4
CDK4-208ENST00000551706 GRID2IPA4D2P6 1211 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 CDKN2BP42772 138 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 MAPK8P45983 427 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 CSNK1DP48730 415 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 METAP1P53582 386 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 CCZ1BP86790 482 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 CCZ1P86791 482 aaPredicted RBP17.56■□□□□ 0.4
CDK4-208ENST00000551706 NSUN2Q08J23 767 aaKnown RBP eCLIP17.56■□□□□ 0.4
CDK4-208ENST00000551706 LBRQ14739 615 aaKnown RBP17.56■□□□□ 0.4
CDK4-208ENST00000551706 TAZQ16635 292 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 POM121L1PQ3SYA9 428 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 AGBL4Q5VU57 503 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 DCAF12L1Q5VU92 463 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 PEAR1Q5VY43 1037 aaPredicted RBP17.56■□□□□ 0.4
CDK4-208ENST00000551706 MFSD7Q6UXD7 560 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 ERN2Q76MJ5 926 aaKnown RBP17.56■□□□□ 0.4
CDK4-208ENST00000551706 RFX6Q8HWS3 928 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 RGL4Q8IZJ4 473 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 LRRC57Q8N9N7 239 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 OR6K2Q8NGY2 324 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 EXD1Q8NHP7 514 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 CEP76Q8TAP6 659 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 DNASE2BQ8WZ79 361 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 FATE1Q969F0 183 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 TSGA13Q96PP4 275 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 CPEB1Q9BZB8 566 aaKnown RBP17.56■□□□□ 0.4
CDK4-208ENST00000551706 C6orf106Q9H6K1 298 aaPredicted RBP17.56■□□□□ 0.4
CDK4-208ENST00000551706 TMEM9BQ9NQ34 198 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 HAUS2Q9NVX0 235 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 SUSD2Q9UGT4 822 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 PCDHA3Q9Y5H8 950 aa17.56■□□□□ 0.4
CDK4-208ENST00000551706 FAM47DPA6NHR8 397 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 PLRG1O43660 514 aaKnown RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 GNSP15586 552 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 ITPKAP23677 461 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 CCNCP24863 283 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 CTNNA2P26232 953 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 NEK3P51956 506 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 COPS2P61201 443 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 GBE1Q04446 702 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 ZNF235Q14590 738 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 SOWAHCQ53LP3 525 aaPredicted RBP17.55■□□□□ 0.4
CDK4-208ENST00000551706 ZNF805Q5CZA5 627 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 TFDP3Q5H9I0 405 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 MARC1Q5VT66 337 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 KIAA0895LQ68EN5 471 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 NCEH1Q6PIU2 408 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 GDPD4Q6W3E5 623 aa17.55■□□□□ 0.4
CDK4-208ENST00000551706 SPOCD1Q6ZMY3 1216 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms