RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 DENND6BQ8NEG7 585 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 TMIEQ8NEW7 156 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 CCL4L1Q8NHW4 92 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 DQX1Q8TE96 717 aaKnown RBP13.67□□□□□ -0.22
SNRPF-203ENST00000551316 VOPP1Q96AW1 172 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 UBXN6Q9BZV1 441 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 DYRK4Q9NR20 520 aa13.67□□□□□ -0.22
SNRPF-203ENST00000551316 VPS13CQ709C8 3753 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 PRSS44E7EML9 344 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 ZNF821O75541 412 aaPredicted RBP13.66□□□□□ -0.22
SNRPF-203ENST00000551316 ENDOD1O94919 500 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 DLGAP3O95886 979 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 THRAP10827 490 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 NEK4P51957 841 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 RAD23BP54727 409 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 SULT2A1Q06520 285 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 ABHD18Q0P651 414 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 ZRANB3Q5FWF4 1079 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 JMJD6Q6NYC1 403 aaPredicted RBP13.66□□□□□ -0.22
SNRPF-203ENST00000551316 FOXR2Q6PJQ5 311 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 OGFOD3Q6PK18 319 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 DPY19L3Q6ZPD9 716 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 SV2BQ7L1I2 683 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 TAC4Q86UU9 113 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 PIM3Q86V86 326 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 NRSN1Q8IZ57 195 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 PRMT1Q99873 361 aaKnown RBP13.66□□□□□ -0.22
SNRPF-203ENST00000551316 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
SNRPF-203ENST00000551316 FEM1AQ9BSK4 669 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 SLC29A3Q9BZD2 475 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 NBEAL1Q6ZS30 2694 aa13.66□□□□□ -0.22
SNRPF-203ENST00000551316 CDC14CA4D256 554 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 XPO1O14980 1071 aaKnown RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ZG16O60844 167 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ALPIP09923 528 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 LCP1P13796 627 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 PNLIPP16233 465 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 CD1CP29017 333 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 LEPRP48357 1165 aaKnown RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 LIMK2P53671 638 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 PITX1P78337 314 aaPredicted RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 IRF4Q15306 451 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ARHGAP17Q68EM7 881 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 C22orf39Q6P5X5 142 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ZNF517Q6ZMY9 492 aaPredicted RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ANKRD52Q8NB46 1076 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 OR6C4Q8NGE1 309 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 UBA3Q8TBC4 463 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 FEM1CQ96JP0 617 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 IPO9Q96P70 1041 aaKnown RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 NIF3L1Q9GZT8 377 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 INTS2Q9H0H0 1204 aaKnown RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ZSCAN16Q9H4T2 348 aaPredicted RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 LRRC4Q9HBW1 653 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 ASF1BQ9NVP2 202 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
SNRPF-203ENST00000551316 IL36AQ9UHA7 158 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 TSPAN16Q9UKR8 245 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 POLHQ9Y253 713 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 HS3ST2Q9Y278 367 aa13.65□□□□□ -0.22
SNRPF-203ENST00000551316 NSD1Q96L73 2696 aaPredicted RBP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 M0QYT0 321 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 EIF3DO15371 548 aaKnown RBP eCLIP13.64□□□□□ -0.238e-8■■□□□ 12
SNRPF-203ENST00000551316 STK17BO94768 372 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 MAP3K6O95382 1288 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 PRNPP04156 253 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 SNRPB2P08579 225 aaKnown RBP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 CTSEP14091 401 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 ITIH2P19823 946 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 MAP4P27816 1152 aaKnown RBP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 GKP32189 559 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 RGS7P49802 495 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 SLC12A1Q13621 1099 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 ARHGEF7Q14155 803 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 EDRF1Q3B7T1 1238 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 DCAF12Q5T6F0 453 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 SLC6A19Q695T7 634 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 GKN2Q86XP6 184 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 FAM186BQ8IYM0 893 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 AGBL5Q8NDL9 886 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 TAS1R2Q8TE23 839 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 PATE1Q8WXA2 126 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 SCG3Q8WXD2 468 aaKnown RBP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 HAPLN3Q96S86 360 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 RBM15Q96T37 977 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 MLXIPLQ9NP71 852 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 VPS51Q9UID3 782 aa13.64□□□□□ -0.23
SNRPF-203ENST00000551316 TMEM184BQ9Y519 407 aaPredicted RBP13.64□□□□□ -0.23
SNRPF-203ENST00000551316 B4E171 279 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 AP1G1O43747 822 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 NUDT21O43809 227 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 EXOC3O60645 756 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 PPP6R2O75170 966 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 ZNF28P17035 718 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 ALDH4A1P30038 563 aa13.63□□□□□ -0.23
SNRPF-203ENST00000551316 HNRNPH3P31942 346 aaKnown RBP13.63□□□□□ -0.23
SNRPF-203ENST00000551316 TSPAN7P41732 249 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms