RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 UBAP2Q5T6F2 1119 aaKnown RBP12.74□□□□□ -0.37
CACNB3-214ENST00000550168 PDPK2PQ6A1A2 396 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 CAPN12Q6ZSI9 719 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 GRASPQ7Z6J2 395 aaPredicted RBP12.74□□□□□ -0.37
CACNB3-214ENST00000550168 TRABD2AQ86V40 505 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 AGGF1Q8N302 714 aaeCLIP12.74□□□□□ -0.37
CACNB3-214ENST00000550168 CELF5Q8N6W0 485 aaKnown RBP12.74□□□□□ -0.37
CACNB3-214ENST00000550168 OR7D4Q8NG98 312 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 ARRDC2Q8TBH0 407 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 E2F7Q96AV8 911 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 MRGPRX2Q96LB1 330 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 NUDCD1Q96RS6 583 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 SMC6Q96SB8 1091 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 FEM1AQ9BSK4 669 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 FICDQ9BVA6 458 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 HCFC1R1Q9NWW0 138 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 SYBUQ9NX95 663 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 MARK1Q9P0L2 795 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 TXNDC16Q9P2K2 825 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 RIMKLBQ9ULI2 386 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 RPS6KL1Q9Y6S9 549 aa12.74□□□□□ -0.37
CACNB3-214ENST00000550168 A0A0D9SEW6 157 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 LOC285095A0A1B0GVY8 99 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 CBX4O00257 560 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 MT-CYBP00156 380 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 PENKP01210 267 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 SNRPAP09012 282 aaKnown RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 HOXB8P17481 243 aaPredicted RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 GCAP28676 217 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 MDH1P40925 334 aaKnown RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 CD86P42081 329 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 CSNK1DP48730 415 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 ZXDBP98169 803 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 KCNC3Q14003 757 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 SPARCL1Q14515 664 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 TERF2Q15554 542 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 UGP2Q16851 508 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 ANKRD20A4Q4UJ75 823 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 PKN3Q6P5Z2 889 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 EXOC3L1Q86VI1 746 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 CTAGE3PQ8IX95 158 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 LMNTD2Q8IXW0 634 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 PRSS33Q8NF86 280 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 VN1R2Q8NFZ6 395 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 SPATA22Q8NHS9 363 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 DCAKDQ8WVC6 231 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 WBP2Q969T9 261 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 IFT43Q96FT9 208 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 CERS2Q96G23 380 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 SGSM3Q96HU1 749 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 SRPK1Q96SB4 655 aaKnown RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 SEMA3CQ99985 751 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 NSUN3Q9H649 340 aaKnown RBP12.73□□□□□ -0.37
CACNB3-214ENST00000550168 NKIRAS1Q9NYS0 192 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 GDE1Q9NZC3 331 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 LMCD1Q9NZU5 365 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 ZFATQ9P243 1243 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 TCAF1Q9Y4C2 921 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 OR51B4Q9Y5P0 310 aa12.73□□□□□ -0.37
CACNB3-214ENST00000550168 NYNRINQ9P2P1 1898 aaKnown RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 F5H423 210 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 PER2O15055 1255 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 INSIG1O15503 277 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 PRPF4O43172 522 aaKnown RBP eCLIP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 PMPCBO75439 489 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 ZMPSTE24O75844 475 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 NDST3O95803 873 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 C1QAP02745 245 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 BRAFP15056 766 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 GJA1P17302 382 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 CR2P20023 1033 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 PBX2P40425 430 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 HADHAP40939 763 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 CSKP41240 450 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 NRIP1P48552 1158 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SERPINH1P50454 418 aaKnown RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SGSHP51688 502 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 AP1S1P61966 158 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 CDK18Q07002 472 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SLC1A5Q15758 541 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SLC5A9Q2M3M2 681 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 STXBP5Q5T5C0 1151 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 DENND5AQ6IQ26 1287 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 ADGRD2Q7Z7M1 963 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 MPP5Q8N3R9 675 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 PPM1NQ8N819 430 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 CALML6Q8TD86 181 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SCG3Q8WXD2 468 aaKnown RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 ZNF669Q96BR6 464 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 TCEAL4Q96EI5 215 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 ALG14Q96F25 216 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 ZNF419Q96HQ0 510 aaPredicted RBP12.72□□□□□ -0.37
CACNB3-214ENST00000550168 CPNE1Q99829 537 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 ADGRE3Q9BY15 652 aa12.72□□□□□ -0.37
CACNB3-214ENST00000550168 SCUBE2Q9NQ36 999 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms