RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 PROSER1Q86XN7 944 aa16.16■□□□□ 0.18
COX6A1-203ENST00000550009 OR2AP1Q8NGE2 309 aa16.16■□□□□ 0.18
COX6A1-203ENST00000550009 ISG20Q96AZ6 181 aaKnown RBP16.16■□□□□ 0.18
COX6A1-203ENST00000550009 SKA1Q96BD8 255 aa16.16■□□□□ 0.18
COX6A1-203ENST00000550009 SNRNP25Q9BV90 132 aaKnown RBP16.16■□□□□ 0.18
COX6A1-203ENST00000550009 SLC17A9Q9BYT1 436 aa16.16■□□□□ 0.18
COX6A1-203ENST00000550009 FAM208BQ5VWN6 2430 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 TMEM8BA6NDV4 472 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 FTLP02792 175 aaPredicted RBP16.15■□□□□ 0.18
COX6A1-203ENST00000550009 PSMA2P25787 234 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 ARRB1P49407 418 aaPredicted RBP16.15■□□□□ 0.18
COX6A1-203ENST00000550009 CYP4F3Q08477 520 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 SERINC3Q13530 473 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 NR1I3Q14994 352 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 PROX2Q3B8N5 592 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 ZNF805Q5CZA5 627 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 PLEKHA7Q6IQ23 1121 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 IQCHQ86VS3 1027 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 ZSWIM9Q86XI8 627 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 CPNE8Q86YQ8 564 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 NPWQ8N729 165 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 SLC39A8Q9C0K1 460 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 TCEAL2Q9H3H9 227 aaPredicted RBP16.15■□□□□ 0.18
COX6A1-203ENST00000550009 LRRC19Q9H756 370 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 PDFQ9HBH1 243 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 CBX8Q9HC52 389 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 MYO1AQ9UBC5 1043 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 AP4E1Q9UPM8 1137 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 RAXQ9Y2V3 346 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 COQ6Q9Y2Z9 468 aa16.15■□□□□ 0.18
COX6A1-203ENST00000550009 ARHGEF17Q96PE2 2063 aaPredicted RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 LY6G6EA0A0G2JKS1 128 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 TTC24A2A3L6 582 aaPredicted RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 TMEM191CA6NGB0 347 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 WASH4PA8MWX3 477 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 BUB1BO60566 1050 aaPredicted RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 MMP20O60882 483 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 GSRP00390 522 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 TIMP2P16035 220 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 AKT2P31751 481 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 ETFBP38117 255 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 TPI1P60174 286 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 FZD2Q14332 565 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 TXNRD3NBQ6F5E7 133 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 NEK5Q6P3R8 708 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 ARHGAP12Q8IWW6 846 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 FUBP1Q96AE4 644 aaKnown RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 CRELD1Q96HD1 420 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 PPP1R16AQ96I34 528 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 BTBD6Q96KE9 485 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 WRAP53Q9BUR4 548 aaKnown RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 DHX35Q9H5Z1 703 aaKnown RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 CCDC86Q9H6F5 360 aaKnown RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 MBNL1Q9NR56 388 aaKnown RBP16.14■□□□□ 0.17
COX6A1-203ENST00000550009 GPR27Q9NS67 375 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 AIPL1Q9NZN9 384 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 HPCAL4Q9UM19 191 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 U3KQA8 63 aa16.14■□□□□ 0.17
COX6A1-203ENST00000550009 AREL1O15033 823 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 RFPL3O75679 317 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 PIAS2O75928 621 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 IL1R2P27930 398 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 MIPP30301 263 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 IGFALSP35858 605 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 PAPOLAP51003 745 aaKnown RBP16.13■□□□□ 0.17
COX6A1-203ENST00000550009 SNRPD1P62314 119 aaKnown RBP16.13■□□□□ 0.17
COX6A1-203ENST00000550009 RPS21P63220 83 aaKnown RBP16.13■□□□□ 0.17
COX6A1-203ENST00000550009 TCEA2Q15560 299 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 HES3Q5TGS1 186 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 GDPD4Q6W3E5 623 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 PLPP6Q8IY26 295 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 FEM1CQ96JP0 617 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 C1QTNF2Q9BXJ5 285 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 KLHL11Q9NVR0 708 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 TMEM51Q9NW97 253 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 DNAJC28Q9NX36 388 aa16.13■□□□□ 0.17
COX6A1-203ENST00000550009 CNOT8Q9UFF9 292 aaKnown RBP16.13■□□□□ 0.17
COX6A1-203ENST00000550009 MGAQ8IWI9 3026 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 SMTNL1A8MU46 457 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 SCAMP1O15126 338 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 MUSKO15146 869 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 AP1G1O43747 822 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 POP4O95707 220 aaKnown RBP16.12■□□□□ 0.17
COX6A1-203ENST00000550009 NUDT1P36639 197 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 PBX1P40424 430 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 PRKCIP41743 596 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 RHOAP61586 193 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 KLHL30Q0D2K2 578 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 EIF2B5Q13144 721 aaKnown RBP16.12■□□□□ 0.17
COX6A1-203ENST00000550009 TARDBPQ13148 414 aaKnown RBP eCLIP16.12■□□□□ 0.17
COX6A1-203ENST00000550009 SMTNL2Q2TAL5 461 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 INAVAQ3KP66 663 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 HGSNATQ68CP4 663 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 KCTD16Q68DU8 428 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 KIAA1161Q6NSJ0 714 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 VPS36Q86VN1 386 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 RBFAQ8N0V3 343 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 UMODL1-AS1Q8N2C9 162 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 ZNF653Q96CK0 615 aa16.12■□□□□ 0.17
COX6A1-203ENST00000550009 EPAS1Q99814 870 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms