RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 MYLKQ15746 1914 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 NAPEPLDQ6IQ20 393 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 MYO1HQ8N1T3 1032 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 COLEC11Q9BWP8 271 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 RHOBTB2Q9BYZ6 727 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRPV6Q9H1D0 765 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 MROH8Q9H579 483 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 LIN28AQ9H9Z2 209 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 GALNT8Q9NY28 637 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 EPS15L1Q9UBC2 864 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 AP4S1Q9Y587 144 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 PRORSD1PA6NEY8 169 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 FBP2O00757 339 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 NCAM2O15394 837 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMCC1O94876 653 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 RPL10P27635 214 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 HADHAP40939 763 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 DAOAP59103 153 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 SULT2A1Q06520 285 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRIM25Q14258 630 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 RFTN1Q14699 578 aaPredicted RBP14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 SV2CQ496J9 727 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 AGKQ53H12 422 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 MTX3Q5HYI7 312 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 PITRM1Q5JRX3 1037 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 RWDD4Q6NW29 188 aaKnown RBP14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 PELI3Q8N2H9 469 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 CEP70Q8NHQ1 597 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLCO4A1Q96BD0 722 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 ASB9Q96DX5 294 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC29A1Q99808 456 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 CIB1Q99828 191 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC39A3Q9BRY0 314 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 CRTAC1Q9NQ79 661 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 PLK2Q9NYY3 685 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMCO1Q9UM00 188 aa14.29□□□□□ -0.12
RAPGEF3-218ENST00000548919 PENKP01210 267 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CAPNS1P04632 268 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 FAM200BP0CF97 657 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CYP2C9P11712 490 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ADSLP30566 484 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 HK2P52789 917 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SH3BGRP55822 239 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CSHL1Q14406 222 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PKN3Q6P5Z2 889 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CHERPQ8IWX8 916 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 OR9I1Q8NGQ6 314 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SPPL2BQ8TCT7 592 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 KCTD13Q8WZ19 329 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 LPGAT1Q92604 370 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 MAELQ96JY0 434 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZFP42Q96MM3 310 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SMOQ99835 787 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 MRPL46Q9H2W6 279 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 WDCPQ9H6R7 721 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 NCKIPSDQ9NZQ3 722 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CEPT1Q9Y6K0 416 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PDCD11Q14690 1871 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CDK4P11802 303 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 TSPAN8P19075 237 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CHRNA4P43681 627 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PRKAA2P54646 552 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 NR1H2P55055 460 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SCAPQ12770 1279 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PRPSAP1Q14558 356 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 TMEM259Q4ZIN3 620 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 RBM20Q5T481 1227 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 IL31Q6EBC2 164 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF470Q6ECI4 717 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 LIMS2Q7Z4I7 341 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 LCA5Q86VQ0 697 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ERO1BQ86YB8 467 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 TSPAN14Q8NG11 270 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 NTAN1Q96AB6 310 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SLC9A7Q96T83 725 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 FICDQ9BVA6 458 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 NOL11Q9H8H0 719 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CACNA2D2Q9NY47 1150 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SCN4AP35499 1836 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ARHGEF37A1IGU5 675 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 TRPC5OSA6NMA1 111 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PLOD2O00469 737 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 MMP3P08254 477 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SMPD1P17405 629 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CDH2P19022 906 aaPredicted RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 WARSP23381 471 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PNPLA4P41247 253 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ARCN1P48444 511 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 HSPA13P48723 471 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 HPCAP84074 193 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 IKBKEQ14164 716 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 FASTKQ14296 549 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 ZNF789Q5FWF6 425 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 NOMO2Q5JPE7 1267 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 REP15Q6BDI9 236 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 DPF3Q92784 378 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 PHF21BQ96EK2 531 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 CCT7Q99832 543 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 TBL1YQ9BQ87 522 aa14.28□□□□□ -0.12
RAPGEF3-218ENST00000548919 SIK2Q9H0K1 926 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms