RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 HYOU1Q9Y4L1 999 aa16■□□□□ 0.15
DDX54-205ENST00000548786 TP53BP1Q12888 1972 aaPredicted RBP16■□□□□ 0.15
DDX54-205ENST00000548786 CXorf51AA0A1B0GTR3 108 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 TTC24A2A3L6 582 aaPredicted RBP15.99■□□□□ 0.15
DDX54-205ENST00000548786 C10orf142B7Z368 130 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 H0Y8X5 98 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 NEMP1O14524 444 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 SH3BP5O60239 455 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 ITIH2P19823 946 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 ZNF135P52742 658 aaPredicted RBP15.99■□□□□ 0.15
DDX54-205ENST00000548786 RAD51Q06609 339 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 DPYSL3Q14195 570 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 ZNF284Q2VY69 593 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 SETMARQ53H47 684 aaPredicted RBP15.99■□□□□ 0.15
DDX54-205ENST00000548786 N4BP2L1Q5TBK1 243 aaPredicted RBP15.99■□□□□ 0.15
DDX54-205ENST00000548786 NAPEPLDQ6IQ20 393 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 IL27RAQ6UWB1 636 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 HORMAD1Q86X24 394 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 PLPP6Q8IY26 295 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 TSC1Q92574 1164 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 TM7SF3Q9NS93 570 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 FADS3Q9Y5Q0 445 aa15.99■□□□□ 0.15
DDX54-205ENST00000548786 SPAARA0A1B0GVQ0 90 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 VILLO15195 856 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 MFSD11O43934 449 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 IL4RP24394 825 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 CTSKP43235 329 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 CLDN2P57739 230 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 FAM193AP78312 1265 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 NAXDQ8IW45 347 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 ATPAF2Q8N5M1 289 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 LZTR1Q8N653 840 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 PAF1Q8N7H5 531 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 SETD7Q8WTS6 366 aaKnown RBP15.98■□□□□ 0.15
DDX54-205ENST00000548786 LRRN4Q8WUT4 740 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 RFFLQ8WZ73 363 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 MRFAP1L1Q96HT8 127 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 OSBPL1AQ9BXW6 950 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 SLC32A1Q9H598 525 aa15.98■□□□□ 0.15
DDX54-205ENST00000548786 A0A1W2PR77 199 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 MUSKO15146 869 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 SPINT1O43278 529 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 BUB1BO60566 1050 aaPredicted RBP15.97■□□□□ 0.15
DDX54-205ENST00000548786 PRKCGP05129 697 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 MAGEA1P43355 309 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 ARSEP51690 589 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 SEMG2Q02383 582 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 IL10RBQ08334 325 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 SLC10A7Q0GE19 358 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 LBRQ14739 615 aaKnown RBP15.97■□□□□ 0.15
DDX54-205ENST00000548786 STAT4Q14765 748 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 SLC45A4Q5BKX6 768 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 ANKRD20A8PQ5CZ79 823 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 CFAP58Q5T655 872 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 KDM7AQ6ZMT4 941 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 PIP4P1Q86T03 277 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 TTC7BQ86TV6 843 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 CAMK1DQ8IU85 385 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 SKA1Q96BD8 255 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 LRIG1Q96JA1 1093 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 WRAP53Q9BUR4 548 aaKnown RBP15.97■□□□□ 0.15
DDX54-205ENST00000548786 GOLPH3Q9H4A6 298 aa15.97■□□□□ 0.15
DDX54-205ENST00000548786 LRRD1A4D1F6 860 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 IGLON5A6NGN9 336 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 PRAMEF26H0Y7S4 382 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 TLR4O00206 839 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 KRT7P08729 469 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 CSRP1P21291 193 aaKnown RBP15.96■□□□□ 0.15
DDX54-205ENST00000548786 XPAP23025 273 aaPredicted RBP15.96■□□□□ 0.15
DDX54-205ENST00000548786 MAN1A1P33908 653 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 SERPINB6P35237 376 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 NOP2P46087 812 aaKnown RBP15.96■□□□□ 0.15
DDX54-205ENST00000548786 CCT8P50990 548 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 SCNN1BP51168 640 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 RPS21P63220 83 aaKnown RBP15.96■□□□□ 0.15
DDX54-205ENST00000548786 SIM1P81133 766 aaPredicted RBP15.96■□□□□ 0.15
DDX54-205ENST00000548786 FOXK2Q01167 660 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 FGL2Q14314 439 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 ZNF235Q14590 738 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 TMEM259Q4ZIN3 620 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 TMCO4Q5TGY1 634 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 NCBP2-AS2Q69YL0 99 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 NEK5Q6P3R8 708 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 SRLQ86TD4 932 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 GATAD2AQ86YP4 633 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 RHOT2Q8IXI1 618 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.96■□□□□ 0.15
DDX54-205ENST00000548786 SPC24Q8NBT2 197 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 PCDH19Q8TAB3 1148 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 RAPGEF5Q92565 580 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 FEM1CQ96JP0 617 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 CAAP1Q9H8G2 361 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 TPX2Q9ULW0 747 aaKnown RBP15.96■□□□□ 0.15
DDX54-205ENST00000548786 DMTF1Q9Y222 760 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 SHROOM3Q8TF72 1996 aa15.96■□□□□ 0.15
DDX54-205ENST00000548786 RAD51BO15315 384 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 MAFKO60675 156 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 MMP20O60882 483 aa15.95■□□□□ 0.14
DDX54-205ENST00000548786 PAK4O96013 591 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms