RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 A6NNZ2 444 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 FPGTO14772 594 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 PAK4O96013 591 aaPredicted RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 SERPING1P05155 500 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 UGT2B4P06133 528 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 SKILP12757 684 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 PRLRP16471 622 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 MIPP30301 263 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 PCK1P35558 622 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 ZBED6P86452 979 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 ILKQ13418 452 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 PIGHQ14442 188 aaPredicted RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 SHBQ15464 509 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 TDRD12Q587J7 1177 aaKnown RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 RFX8Q6ZV50 586 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 PARS2Q7L3T8 475 aaKnown RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 ABI3BPQ7Z7G0 1075 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 DNAAF5Q86Y56 855 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 LZTR1Q8N653 840 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 EID2Q8N6I1 236 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 PDCD7Q8N8D1 485 aaKnown RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 KLK6Q92876 244 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 HMCESQ96FZ2 354 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 CNDP2Q96KP4 475 aaKnown RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 KLHL32Q96NJ5 620 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 LENG8Q96PV6 779 aaPredicted RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.55□□□□□ -0.56
BEST3-209ENST00000548658 C1QTNF7Q9BXJ2 289 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 C1QTNF2Q9BXJ5 285 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 LRRC19Q9H756 370 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 ZWILCHQ9H900 591 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 DKK3Q9UBP4 350 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 PCSK1NQ9UHG2 260 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 CAPN11Q9UMQ6 739 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 ZFR2Q9UPR6 939 aaKnown RBP11.55□□□□□ -0.56
BEST3-209ENST00000548658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.55□□□□□ -0.56
BEST3-209ENST00000548658 ACTL7AQ9Y615 435 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 TRPM6Q9BX84 2022 aa11.55□□□□□ -0.56
BEST3-209ENST00000548658 MAP1BP46821 2468 aaKnown RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 COL5A1P20908 1838 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 GOLGA8CPA6NN73 597 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 RNF103O00237 685 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 ENC1O14682 589 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 XPAP23025 273 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 PBX1P40424 430 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 RABIFP47224 123 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 ELP6Q0PNE2 266 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 BNIP3Q12983 259 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 RFTN1Q14699 578 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 PPP6R3Q5H9R7 873 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 ATXN7L2Q5T6C5 722 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 E4F1Q66K89 784 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 SEL1L3Q68CR1 1132 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 LEKR1Q6ZMV7 388 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 Q6ZSR6 202 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 TMPRSS12Q86WS5 348 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 DENND6BQ8NEG7 585 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 OR6K2Q8NGY2 324 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 ZNF641Q96N77 438 aaPredicted RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 TUBGCP5Q96RT8 1024 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 SNRNP25Q9BV90 132 aaKnown RBP11.54□□□□□ -0.56
BEST3-209ENST00000548658 CALN1Q9BXU9 219 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 MYO1AQ9UBC5 1043 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
BEST3-209ENST00000548658 DOCK9Q9BZ29 2069 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 IGLON5A6NGN9 336 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 H3BRJ5 948 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 TOR1BO14657 336 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 AREL1O15033 823 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 PRAMEF11O60813 436 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 LRCH4O75427 683 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 PALMO75781 387 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 ALPPL2P10696 532 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 CKMT2P17540 419 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 ERCC2P18074 760 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 GKP32189 559 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 HNF1BP35680 557 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 ARL4AP40617 200 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 CSNK1DP48730 415 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 HNRNPKP61978 463 aaKnown RBP eCLIP11.53□□□□□ -0.56
BEST3-209ENST00000548658 NSUN2Q08J23 767 aaKnown RBP eCLIP11.53□□□□□ -0.56
BEST3-209ENST00000548658 ZNF211Q13398 564 aaPredicted RBP11.53□□□□□ -0.56
BEST3-209ENST00000548658 PTK2BQ14289 1009 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 CYTH1Q15438 398 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 SMAD1Q15797 465 aaKnown RBP11.53□□□□□ -0.56
BEST3-209ENST00000548658 ZSCAN23Q3MJ62 389 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 CFAP58Q5T655 872 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 HGSNATQ68CP4 663 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 BRAT1Q6PJG6 821 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 KYAT3Q6YP21 454 aaKnown RBP11.53□□□□□ -0.56
BEST3-209ENST00000548658 ARFGAP1Q8N6T3 406 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 OR13H1Q8NG92 308 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 CPLX3Q8WVH0 158 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 ZCCHC14Q8WYQ9 949 aaKnown RBP11.53□□□□□ -0.56
BEST3-209ENST00000548658 BMFQ96LC9 184 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 MYOCQ99972 504 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 SLC39A8Q9C0K1 460 aa11.53□□□□□ -0.56
BEST3-209ENST00000548658 SUV39H2Q9H5I1 410 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms