RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 DSC2Q02487 901 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 RASIP1Q5U651 963 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 MARC1Q5VT66 337 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 RAP1GAP2Q684P5 730 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 FBXL22Q6P050 247 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 RIPOR1Q6ZS17 1223 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 SPNS2Q8IVW8 549 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 PABPC5Q96DU9 382 aaKnown RBP18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 ELMO2Q96JJ3 720 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 OR52B2Q96RD2 323 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 CRISPLD1Q9H336 500 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 XPR1Q9UBH6 696 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 FBXO5Q9UKT4 447 aa18.73■□□□□ 0.59
PRPF40B-208ENST00000548436 F8W8V4 182 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 DCXO43602 365 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 DLX3O60479 287 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 HMBSP08397 361 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 CD151P48509 253 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 GATMP50440 423 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 NAGLUP54802 743 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC34A1Q06495 639 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 MSLNQ13421 630 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 TRIP4Q15650 581 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 ZNF789Q5FWF6 425 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 ARL13AQ5H913 290 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 NEPROQ6NW34 567 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 CNSTQ6PJW8 725 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 CIR1Q86X95 450 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 KIRREL3Q8IZU9 778 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 ATP6V0D2Q8N8Y2 350 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 GPATCH11Q8N954 259 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 FATE1Q969F0 183 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 BTN2A3PQ96KV6 586 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 PRKD2Q9BZL6 878 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 YY1AP1Q9H869 796 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 TMEM161AQ9NX61 479 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 STX18Q9P2W9 335 aaKnown RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 ZNF212Q9UDV6 495 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 RAP2CQ9Y3L5 183 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 MOXD2PA6NHM9 499 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 MATN2O00339 956 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 PIGNO95427 931 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 DNAJB1P25685 340 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 SERPINH1P50454 418 aaKnown RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 TAF10Q12962 218 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 TRMT5Q32P41 509 aaKnown RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 RALGPS1Q5JS13 557 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 TSTD2Q5T7W7 516 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 SNX30Q5VWJ9 437 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 ZNF280DQ6N043 979 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 RSPO2Q6UXX9 243 aaPredicted RBP18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 MAB21L3Q8N8X9 362 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 FAM167BQ9BTA0 163 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 SP110Q9HB58 689 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 CLIC5Q9NZA1 410 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 MARCH2Q9P0N8 246 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 HCSTQ9UBK5 93 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 ZDHHC2Q9UIJ5 367 aa18.72■□□□□ 0.59
PRPF40B-208ENST00000548436 A0A1W2PQ45 241 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 A0A1W2PQY0 241 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 HEATR9A2RTY3 570 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 CIB2O75838 187 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 VNN2O95498 520 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 CRABP2P29373 138 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 ERFP50548 548 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 RPL14P50914 215 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 ACTR3P61158 418 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 PEX6Q13608 980 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 NAA25Q14CX7 972 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 C10orf120Q5SQS8 335 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 RBM20Q5T481 1227 aaKnown RBP18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 TMC7Q7Z402 723 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 ZNF354CQ86Y25 554 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 LSMEM2Q8N112 164 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 PGBD5Q8N414 524 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 TEX26Q8N6G2 289 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 PNPLA1Q8N8W4 532 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 SLC43A3Q8NBI5 491 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 TET1Q8NFU7 2136 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 MYEOVQ96EZ4 313 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 OMDQ99983 421 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 WDR55Q9H6Y2 383 aaPredicted RBP18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 NMRK1Q9NWW6 199 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 SRRDQ9UH36 339 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 WASF2Q9Y6W5 498 aa18.71■□□□□ 0.59
PRPF40B-208ENST00000548436 GOLGA8QA0A0J9YX86 632 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 LOC100653049A0A140TA62 436 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 GOLGA8OA6NCC3 632 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 GOLGA8NF8WBI6 632 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 KRT34O76011 436 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 GLDCP23378 1020 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 CDC25CP30307 473 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 VHLP40337 213 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 NUMBP49757 651 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 PRKAA2P54646 552 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 CMTM5Q96DZ9 223 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 PPP1R36Q96LQ0 422 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 OSBPL1AQ9BXW6 950 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 TCF7L2Q9NQB0 619 aa18.7■□□□□ 0.58
PRPF40B-208ENST00000548436 MARCH5Q9NX47 278 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms