RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 MFSD2AQ8NA29 543 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 TSC1Q92574 1164 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 VOPP1Q96AW1 172 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 CPEB1Q9BZB8 566 aaKnown RBP16.12■□□□□ 0.17
DDX54-204ENST00000546898 TM7SF3Q9NS93 570 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 SPTLC3Q9NUV7 552 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 INTUQ9ULD6 942 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 FNDC3AQ9Y2H6 1198 aaKnown RBP16.12■□□□□ 0.17
DDX54-204ENST00000546898 FADS3Q9Y5Q0 445 aa16.12■□□□□ 0.17
DDX54-204ENST00000546898 MTA2O94776 668 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 PCDH8O95206 1070 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 WNT1P04628 370 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 KRT7P08729 469 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 AMPD1P23109 780 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 GKP32189 559 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 CCT8P50990 548 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 TMEM259Q4ZIN3 620 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 NAXDQ8IW45 347 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 TC2NQ8N9U0 490 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 RFFLQ8WZ73 363 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 KLHL32Q96NJ5 620 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 ZNF599Q96NL3 588 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 RBSNQ9H1K0 784 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 IL21RQ9HBE5 538 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 GDF3Q9NR23 364 aa16.11■□□□□ 0.17
DDX54-204ENST00000546898 IPO11Q9UI26 975 aaKnown RBP16.11■□□□□ 0.17
DDX54-204ENST00000546898 WNT9AO14904 365 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 YKT6O15498 198 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 FLRT2O43155 660 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 TSPAN6O43657 245 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 PALMO75781 387 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ARHGAP25P42331 645 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ABL2P42684 1182 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 CSNK1DP48730 415 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 SUOXP51687 545 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ZNF75DP51815 510 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 NXPH1P58417 271 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 RPS21P63220 83 aaKnown RBP16.1■□□□□ 0.17
DDX54-204ENST00000546898 STAT4Q14765 748 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 SUZ12Q15022 739 aaKnown RBP16.1■□□□□ 0.17
DDX54-204ENST00000546898 PDK2Q15119 407 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 N4BP2L1Q5TBK1 243 aaPredicted RBP16.1■□□□□ 0.17
DDX54-204ENST00000546898 TMCO4Q5TGY1 634 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 OXR1Q8N573 874 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 TMEM145Q8NBT3 493 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 SLC35G2Q8TBE7 412 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 FAM174AQ8TBP5 190 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 HCAR2Q8TDS4 363 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 FEM1CQ96JP0 617 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 EXOC2Q96KP1 924 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 TUBGCP5Q96RT8 1024 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ZNF670Q9BS34 389 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ANP32EQ9BTT0 268 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 CINPQ9BW66 212 aaPredicted RBP16.1■□□□□ 0.17
DDX54-204ENST00000546898 ETNK2Q9NVF9 386 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 DKK3Q9UBP4 350 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 ZFR2Q9UPR6 939 aaKnown RBP16.1■□□□□ 0.17
DDX54-204ENST00000546898 LRRK1Q38SD2 2015 aa16.1■□□□□ 0.17
DDX54-204ENST00000546898 A0A1B0GTQ1 180 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 TSPAN11A1L157 253 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 H0Y8X5 98 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 TLR4O00206 839 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 GIPC1O14908 333 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 PCDHGA12O60330 932 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 HNRNPA2B1P22626 353 aaKnown RBP16.09■□□□□ 0.17
DDX54-204ENST00000546898 AKT2P31751 481 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 GJC1P36383 396 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 RENBPP51606 427 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 ARSEP51690 589 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 DPYSL3Q14195 570 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 TCEAL1Q15170 157 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 DBX2Q6ZNG2 339 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 ARHGAP36Q6ZRI8 547 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 MAP7D3Q8IWC1 876 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 ATPAF2Q8N5M1 289 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 ZNF641Q96N77 438 aaPredicted RBP16.09■□□□□ 0.17
DDX54-204ENST00000546898 ELF4Q99607 663 aaPredicted RBP16.09■□□□□ 0.17
DDX54-204ENST00000546898 ERVMER34-1Q9H9K5 563 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 SEPT3Q9UH03 358 aa16.09■□□□□ 0.17
DDX54-204ENST00000546898 COL5A1P20908 1838 aaPredicted RBP16.09■□□□□ 0.17
DDX54-204ENST00000546898 NEMP1O14524 444 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 AREL1O15033 823 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 SLC31A1O15431 190 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 SH3BP5O60239 455 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 CD48P09326 243 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 PRLRP16471 622 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 IL4RP24394 825 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 PMLP29590 882 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 HSPA9P38646 679 aaKnown RBP16.08■□□□□ 0.16
DDX54-204ENST00000546898 TAS2R40P59535 323 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 NSUN2Q08J23 767 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX54-204ENST00000546898 MESDQ14696 234 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 LBRQ14739 615 aaKnown RBP16.08■□□□□ 0.16
DDX54-204ENST00000546898 INAVAQ3KP66 663 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 SEL1L3Q68CR1 1132 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 CPNE8Q86YQ8 564 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 LRRC49Q8IUZ0 686 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 CCDC170Q8IYT3 715 aa16.08■□□□□ 0.16
DDX54-204ENST00000546898 BBS5Q8N3I7 341 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms