RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 EVLQ9UI08 416 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 GMEB2Q9UKD1 530 aa14.66□□□□□ -0.06
DDX54-203ENST00000546869 PACSIN2Q9UNF0 486 aaPredicted RBP14.66□□□□□ -0.06
DDX54-203ENST00000546869 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.65□□□□□ -0.06
DDX54-203ENST00000546869 A0A1W2PQ67 120 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 TSPAN11A1L157 253 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 C16orf96A6NNT2 1141 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 HACD1B0YJ81 288 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 RNF103O00237 685 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 MTSS1O43312 755 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 AP1G1O43747 822 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 RGRP47804 291 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 CCR5P51681 352 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 NEK3P51956 506 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 ADPRHP54922 357 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 DYNLT1P63172 113 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 RPS6KA1Q15418 735 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 WDR45BQ5MNZ6 344 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 PLA2G2CQ5R387 149 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 SYCP2LQ5T4T6 812 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 LYSMD4Q5XG99 296 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 NCEH1Q6PIU2 408 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 NPNTQ6UXI9 565 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 FAM124AQ86V42 546 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 ZSCAN30Q86W11 494 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 PGBD5Q8N414 524 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 GPR161Q8N6U8 529 aaKnown RBP14.65□□□□□ -0.06
DDX54-203ENST00000546869 OR14C36Q8NHC7 312 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 GRIN3AQ8TCU5 1115 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 LGMNQ99538 433 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 CARD9Q9H257 536 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 SUV39H2Q9H5I1 410 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 ATP13A3Q9H7F0 1226 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 PREBQ9HCU5 417 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 ATP8A1Q9Y2Q0 1164 aa14.65□□□□□ -0.06
DDX54-203ENST00000546869 NYNRINQ9P2P1 1898 aaKnown RBP14.65□□□□□ -0.06
DDX54-203ENST00000546869 TRAFD1O14545 582 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 INSIG1O15503 277 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 FOXD2O60548 495 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 ZNF189O75820 626 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 MAP3K6O95382 1288 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 ADRB3P13945 408 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 SERPINA4P29622 427 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 GKP32189 559 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 NUDT1P36639 197 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 PTGER3P43115 390 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 DHPSP49366 369 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 SCNN1BP51168 640 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 TAS2R38P59533 333 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 KLF1Q13351 362 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 PRKD1Q15139 912 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 DCAF12L1Q5VU92 463 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 KIAA0895LQ68EN5 471 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 FBXL19Q6PCT2 694 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 BRAT1Q6PJG6 821 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 RABEPKQ7Z6M1 372 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 TRIM69Q86WT6 500 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 SYT12Q8IV01 421 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 TTC13Q8NBP0 860 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 OR6K2Q8NGY2 324 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 TFB1MQ8WVM0 346 aaKnown RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 ECHDC3Q96DC8 303 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 EXOC2Q96KP1 924 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 KLHL32Q96NJ5 620 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 VAT1Q99536 393 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 HERPUD2Q9BSE4 406 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 HEMGNQ9BXL5 484 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 POLR1EQ9GZS1 481 aaKnown RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 C6orf106Q9H6K1 298 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 RBM22Q9NW64 420 aaKnown RBP eCLIP14.64□□□□□ -0.07
DDX54-203ENST00000546869 SAE1Q9UBE0 346 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 PILRBQ9UKJ0 227 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.64□□□□□ -0.07
DDX54-203ENST00000546869 JRKLQ9Y4A0 524 aa14.64□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3DA0A087WVF3 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3IA0A087WXS9 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3EA0A087X179 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3KA0A087X1G2 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 GOLGA6L9A6NEM1 432 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3FA6NER0 549 aaPredicted RBP14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3LB9A6J9 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 HTRA2O43464 458 aaPredicted RBP14.63□□□□□ -0.07
DDX54-203ENST00000546869 LATO43561 262 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 SOCS5O75159 536 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 UGT2B4P06133 528 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3HP0C7X1 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 PECAM1P16284 738 aaPredicted RBP14.63□□□□□ -0.07
DDX54-203ENST00000546869 POLR2LP62875 67 aaKnown RBP14.63□□□□□ -0.07
DDX54-203ENST00000546869 BCL2L1Q07817 233 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 AP1B1Q10567 949 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 LPAL2Q16609 132 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TEX44Q53QW1 395 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3GQ6DHY5 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3CQ6IPX1 549 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 PARS2Q7L3T8 475 aaKnown RBP14.63□□□□□ -0.07
DDX54-203ENST00000546869 TBC1D3Q8IZP1 549 aaPredicted RBP14.63□□□□□ -0.07
DDX54-203ENST00000546869 C1orf216Q8TAB5 229 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 CEP76Q8TAP6 659 aa14.63□□□□□ -0.07
DDX54-203ENST00000546869 BIRC7Q96CA5 298 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms