RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SLC4A7Q9Y6M7 1214 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 MYLKQ15746 1914 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 H0YHG0 523 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 SMAPO00193 183 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 PRAMEF12O95522 483 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 EFEMP2O95967 443 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 IGLV3-27P01718 113 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 RHOCP08134 193 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 CTPS1P17812 591 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 ARRB2P32121 409 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 ABL2P42684 1182 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 SLC1A2P43004 574 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 NEK3P51956 506 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 PLK1P53350 603 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 BST1Q10588 318 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 CMTM8Q8IZV2 173 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 PPP1R14CQ8TAE6 165 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 LRRC39Q96DD0 335 aa12.1□□□□□ -0.47
CCDC38-202ENST00000546386 AAR2Q9Y312 384 aaKnown RBP12.1□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 NEMP2A6NFY4 417 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 INSIG1O15503 277 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 CBX6O95503 412 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 EPCAMP16422 314 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TARSP26639 723 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 HOXD9P28356 352 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 STK19P49842 368 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 CDK16Q00536 496 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF177Q13360 481 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 USP10Q14694 798 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 C9orf50Q5SZB4 431 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 POTEHQ6S545 545 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 RANBP10Q6VN20 620 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 MTDHQ86UE4 582 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 PIM3Q86V86 326 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ARID3BQ8IVW6 561 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 RYBPQ8N488 228 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ANKS4BQ8N8V4 417 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ARRDC2Q8TBH0 407 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 POF1BQ8WVV4 589 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 VPS39Q96JC1 886 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TSGA13Q96PP4 275 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 FCRL5Q96RD9 977 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 IL22Q9GZX6 179 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 LINC00597Q9H2U6 94 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 G3BP2Q9UN86 482 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 FIS1Q9Y3D6 152 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 PATJQ8NI35 1801 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 A0A096LPK6 155 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 A6NNZ2 444 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 H3BNC9 293 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 NDC80O14777 642 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ALDH1A2O94788 518 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 LRG1P02750 347 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 LINC00271P0C7V0 271 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 MLNP12872 115 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ARSAP15289 507 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TSPAN8P19075 237 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 CTSOP43234 321 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 HNRNPDQ14103 355 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ADGRF1Q5T601 910 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 AFMIDQ63HM1 303 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TRPM8Q7Z2W7 1104 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TBC1D1Q86TI0 1168 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 DDX53Q86TM3 631 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TTC8Q8TAM2 541 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 KCTD4Q8WVF5 259 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 SORCS1Q8WY21 1168 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 CCT6BQ92526 530 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 EXT2Q93063 718 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 ERP27Q96DN0 273 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 CCDC97Q96F63 343 aaPredicted RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 DNAJC1Q96KC8 554 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 IL21Q9HBE4 155 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 EIF2B3Q9NR50 452 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 OLA1Q9NTK5 396 aaKnown RBP12.09□□□□□ -0.47
CCDC38-202ENST00000546386 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 BACE2Q9Y5Z0 518 aa12.09□□□□□ -0.47
CCDC38-202ENST00000546386 IGLV3-10A0A075B6K4 115 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 CCT8L1PA6NM43 557 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 GRM6O15303 877 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 MTSS1O43312 755 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 EDF1O60869 148 aaKnown RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SPAG6O75602 509 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ANXA9O76027 345 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SUN1O94901 812 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ZWINTO95229 277 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 OAS1P00973 400 aaKnown RBP12.08□□□□□ -0.48
CCDC38-202ENST00000546386 F11P03951 625 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ALPIP09923 528 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ADRA1AP35348 466 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 PSEN1P49768 467 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 CDH18Q13634 790 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 ITGA9Q13797 1035 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 SLC5A9Q2M3M2 681 aa12.08□□□□□ -0.48
CCDC38-202ENST00000546386 TUBB8Q3ZCM7 444 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms