RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 JOSD2Q8TAC2 188 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CPA5Q8WXQ8 436 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 LGMNQ99538 433 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 TUBGCP2Q9BSJ2 902 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 SPON2Q9BUD6 331 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CLPBQ9H078 707 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 ZDHHC6Q9H6R6 413 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 CPNE5Q9HCH3 593 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 SALL4Q9UJQ4 1053 aa12.76□□□□□ -0.37
COPS7A-221ENST00000546229 MAST4O15021 2626 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 UBR5O95071 2799 aaPredicted RBP12.75□□□□□ -0.37
COPS7A-221ENST00000546229 TPP1O14773 563 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 EPHB6O15197 1021 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 TSPAN6O43657 245 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 LRIG2O94898 1065 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 GJB6O95452 261 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 CELA2BP08218 269 aaPredicted RBP12.75□□□□□ -0.37
COPS7A-221ENST00000546229 RHOQP17081 205 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 ADRA1BP35368 520 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 PTPN9P43378 593 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 MAPKAPK2P49137 400 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 JAM2P57087 298 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 UBE2HP62256 183 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 RAPGEF1Q13905 1077 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 PDE1CQ14123 709 aaPredicted RBP12.75□□□□□ -0.37
COPS7A-221ENST00000546229 BECN1Q14457 450 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 CDKN3Q16667 212 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 ZNF805Q5CZA5 627 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 EFL1Q7Z2Z2 1120 aaKnown RBP12.75□□□□□ -0.37
COPS7A-221ENST00000546229 CLEC14AQ86T13 490 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 CCDC185Q8N715 623 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 OR2AP1Q8NGE2 309 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 ATXN7L3BQ96GX2 97 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 VCPIP1Q96JH7 1222 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 FEM1CQ96JP0 617 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 KLC2Q9H0B6 622 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 OSBPL2Q9H1P3 480 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 HECAQ9UBI9 543 aaPredicted RBP12.75□□□□□ -0.37
COPS7A-221ENST00000546229 SATB2Q9UPW6 733 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 PCDHGA8Q9Y5G5 932 aa12.75□□□□□ -0.37
COPS7A-221ENST00000546229 ANKRD36A6QL64 1941 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 TCRBV5S1A1TA0A578 114 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 NEMP2A6NFY4 417 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 EIF4E1BA6NMX2 242 aaKnown RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 LMO7DNF2Z398 122 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 NTN3O00634 580 aaPredicted RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 JUNDP17535 347 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 RECQLP46063 649 aaPredicted RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 KLK7P49862 253 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 DUSP3P51452 185 aaPredicted RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 TMPRSS3P57727 454 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 ATP11AP98196 1134 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 HSP90AA4PQ58FG1 418 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 LRRC73Q5JTD7 316 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 C6orf132Q5T0Z8 1188 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 ATXN7L2Q5T6C5 722 aaPredicted RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 KCTD16Q68DU8 428 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 STRADAQ7RTN6 431 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 PHACTR4Q8IZ21 702 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 LSMEM2Q8N112 164 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 MAPK15Q8TD08 544 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 GPT2Q8TD30 523 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 RXFP2Q8WXD0 754 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 NTAN1Q96AB6 310 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 WBP1Q96G27 269 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 NAF1Q96HR8 494 aaKnown RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 SLC46A1Q96NT5 459 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 STK33Q9BYT3 514 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 CLSTN2Q9H4D0 955 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 RETREG1Q9H6L5 497 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 MBNL1Q9NR56 388 aaKnown RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
COPS7A-221ENST00000546229 OR12D3Q9UGF7 316 aa12.74□□□□□ -0.37
COPS7A-221ENST00000546229 TSPAN11A1L157 253 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 H3BM21 787 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 FPGTO14772 594 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 TCEA3O75764 348 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 TMCC1O94876 653 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 UGT2B4P06133 528 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 UNGP13051 313 aaPredicted RBP12.73□□□□□ -0.37
COPS7A-221ENST00000546229 PRKCSHP14314 528 aaPredicted RBP12.73□□□□□ -0.37
COPS7A-221ENST00000546229 ITIH2P19823 946 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 ERCC5P28715 1186 aaPredicted RBP12.73□□□□□ -0.37
COPS7A-221ENST00000546229 CDR2Q01850 454 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 CFHR1Q03591 330 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 C3orf38Q5JPI3 329 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 LEKR1Q6ZMV7 388 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 MACC1Q6ZN28 852 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 CREBRFQ8IUR6 639 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 LMX1AQ8TE12 382 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 KCNE4Q8WWG9 221 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 KLHL32Q96NJ5 620 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 PCDHB18PQ96TA0 734 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 OSBPL1AQ9BXW6 950 aa12.73□□□□□ -0.37
COPS7A-221ENST00000546229 DPH1Q9BZG8 443 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms