RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 ACTL7AQ9Y615 435 aa17.73■□□□□ 0.43
CD9-211ENST00000546073 C3orf70A6NLC5 250 aaPredicted RBP17.72■□□□□ 0.43
CD9-211ENST00000546073 PCDH8O95206 1070 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 EPN2O95208 641 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 CD160O95971 181 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 UGT2B4P06133 528 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 CCNB1P14635 433 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 HOXD12P35452 270 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 GBE1Q04446 702 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 CNTN1Q12860 1018 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 ERAP2Q6P179 960 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 NEK5Q6P3R8 708 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 ARHGAP36Q6ZRI8 547 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 SYT12Q8IV01 421 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 TSEN2Q8NCE0 465 aaKnown RBP17.72■□□□□ 0.43
CD9-211ENST00000546073 KRT35Q92764 455 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 FATE1Q969F0 183 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 ZNF419Q96HQ0 510 aaPredicted RBP17.72■□□□□ 0.43
CD9-211ENST00000546073 FEM1CQ96JP0 617 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 EXOC2Q96KP1 924 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 KLHL32Q96NJ5 620 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 HEMGNQ9BXL5 484 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 NUSAP1Q9BXS6 441 aaKnown RBP17.72■□□□□ 0.43
CD9-211ENST00000546073 PREBQ9HCU5 417 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 VPS45Q9NRW7 570 aa17.72■□□□□ 0.43
CD9-211ENST00000546073 hCG_1818297A0A087WSY0 165 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 METTL12A8MUP2 240 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 HACD1B0YJ81 288 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 H7C0C1 242 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 KHNYNO15037 678 aaKnown RBP17.71■□□□□ 0.43
CD9-211ENST00000546073 KIF5CO60282 957 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 MAP3K6O95382 1288 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 C7P10643 843 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 ACSL1P33121 698 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 MPLP40238 635 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 ATP5OP48047 213 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 ATXN3P54252 364 aaPredicted RBP17.71■□□□□ 0.43
CD9-211ENST00000546073 SLC10A7Q0GE19 358 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 TEAD4Q15561 434 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 DCAF12L1Q5VU92 463 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 KIAA0895LQ68EN5 471 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 BRAT1Q6PJG6 821 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 ADAT2Q7Z6V5 191 aaKnown RBP17.71■□□□□ 0.43
CD9-211ENST00000546073 FRMD1Q8N878 549 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 LRRC45Q96CN5 670 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 PDLIM2Q96JY6 352 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 SUV39H2Q9H5I1 410 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 NT5MQ9NPB1 228 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 SARDHQ9UL12 918 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 WASF2Q9Y6W5 498 aa17.71■□□□□ 0.43
CD9-211ENST00000546073 C16orf96A6NNT2 1141 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 APOC4-APOC2K7ER74 178 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 ZNF821O75541 412 aaPredicted RBP17.7■□□□□ 0.42
CD9-211ENST00000546073 APOC2P02655 101 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 PPIDQ08752 370 aaKnown RBP17.7■□□□□ 0.42
CD9-211ENST00000546073 ELP6Q0PNE2 266 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 SGCGQ13326 291 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 LLGL1Q15334 1064 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 DUOXA1Q1HG43 343 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 CCDC70Q6NSX1 233 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 NCEH1Q6PIU2 408 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 BBS12Q6ZW61 710 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 AADATQ8N5Z0 425 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 PDCD6IPQ8WUM4 868 aaKnown RBP17.7■□□□□ 0.42
CD9-211ENST00000546073 MAIP1Q8WWC4 291 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 NUDCD1Q96RS6 583 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 C1QTNF7Q9BXJ2 289 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 DKK3Q9UBP4 350 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 LHX3Q9UBR4 397 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 CAPN6Q9Y6Q1 641 aa17.7■□□□□ 0.42
CD9-211ENST00000546073 MYO18AQ92614 2054 aaKnown RBP17.7■□□□□ 0.42
CD9-211ENST00000546073 BCLAF3A2AJT9 711 aaKnown RBP17.69■□□□□ 0.42
CD9-211ENST00000546073 INSIG1O15503 277 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 TSPAN6O43657 245 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 PLRG1O43660 514 aaKnown RBP17.69■□□□□ 0.42
CD9-211ENST00000546073 CFIP05156 583 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 CTSLP07711 333 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 ADRB3P13945 408 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 PTPN7P35236 360 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 MARCKSL1P49006 195 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 CCR5P51681 352 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 ADPRHP54922 357 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 XRCC4Q13426 336 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 TAZQ16635 292 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 SETMARQ53H47 684 aaPredicted RBP17.69■□□□□ 0.42
CD9-211ENST00000546073 ASCL5Q7RTU5 278 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 ALYREFQ86V81 257 aaKnown RBP17.69■□□□□ 0.42
CD9-211ENST00000546073 CDKL3Q8IVW4 592 aaPredicted RBP17.69■□□□□ 0.42
CD9-211ENST00000546073 CXorf40AQ8TE69 158 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 HES6Q96HZ4 224 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 PHOX2BQ99453 314 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 VAT1Q99536 393 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
CD9-211ENST00000546073 DOCK4Q8N1I0 1966 aa17.69■□□□□ 0.42
CD9-211ENST00000546073 MAGEC1O60732 1142 aa17.68■□□□□ 0.42
CD9-211ENST00000546073 SOCS5O75159 536 aa17.68■□□□□ 0.42
CD9-211ENST00000546073 JCHAINP01591 159 aa17.68■□□□□ 0.42
CD9-211ENST00000546073 SYPP08247 313 aa17.68■□□□□ 0.42
CD9-211ENST00000546073 SERPINF2P08697 491 aa17.68■□□□□ 0.42
CD9-211ENST00000546073 PYGMP11217 842 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms