RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 PSMB7Q99436 277 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 MIS12Q9H081 205 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 HESX1Q9UBX0 185 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 PILRAQ9UKJ1 303 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 HS3ST2Q9Y278 367 aa15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 MRPS18BQ9Y676 258 aaKnown RBP15.65■□□□□ 0.1
CLSTN3-216ENST00000545663 IGHV5-10-1A0A0J9YXX1 117 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 TCAF2A6NFQ2 919 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 MKRN2OSH3BPM6 223 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 CD19P15391 556 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 ABL2P42684 1182 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 VAMP7P51809 220 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 OR1D5P58170 312 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 E2F4Q16254 413 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 CEP135Q66GS9 1140 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 FBXL22Q6P050 247 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 FAM173BQ6P4H8 233 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 PARS2Q7L3T8 475 aaKnown RBP15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 TIPARPQ7Z3E1 657 aaKnown RBP15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 PIM3Q86V86 326 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 MARVELD3Q96A59 401 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 EEF2KMTQ96G04 330 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 POM121Q96HA1 1249 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 CCDC74BQ96LY2 380 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 PCNX1Q96RV3 2341 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 BLZF1Q9H2G9 400 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 TLK1Q9UKI8 766 aa15.64■□□□□ 0.09
CLSTN3-216ENST00000545663 DCHS2Q6V1P9 2916 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 ARHGAP10A1A4S6 786 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 AP1G1O43747 822 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 ZNF821O75541 412 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 APOEP02649 317 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 NR3C1P04150 777 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 MPSTP25325 297 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 L1CAMP32004 1257 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 PITX1P78337 314 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 ARHGEF7Q14155 803 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 NADK2Q4G0N4 442 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 BRAPQ7Z569 592 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 GKN2Q86XP6 184 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 SLC9A9Q8IVB4 645 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 DENND6BQ8NEG7 585 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 STARD8Q92502 1023 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 KIAA1143Q96AT1 154 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 BTN2A3PQ96KV6 586 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 CCDC114Q96M63 670 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 UNKQ9C0B0 810 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 ZSCAN16Q9H4T2 348 aaPredicted RBP15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 OCIAD1Q9NX40 245 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 SLC39A1Q9NY26 324 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 KCND3Q9UK17 655 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 NAV3Q8IVL0 2385 aa15.63■□□□□ 0.09
CLSTN3-216ENST00000545663 CCDC168Q8NDH2 2452 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 KCNU1A8MYU2 1149 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 O00370 1275 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 NEMP1O14524 444 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 CPNE6O95741 557 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 FURINP09958 794 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 SETSIPP0DME0 302 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 PNLIPP16233 465 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 TCN2P20062 427 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 GGCXP38435 758 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 YPEL5P62699 121 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 ANKS6Q68DC2 871 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 OGFOD3Q6PK18 319 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 UNC13DQ70J99 1090 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 FAM46DQ8NEK8 389 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 GOLGA5Q8TBA6 731 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 SLC35F5Q8WV83 523 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 ASB12Q8WXK4 309 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 DDA1Q9BW61 102 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 SPRY4Q9C004 299 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 LRRC27Q9C0I9 530 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 MUC3BQ9H195 1237 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 VPS51Q9UID3 782 aa15.62■□□□□ 0.09
CLSTN3-216ENST00000545663 HGSO14964 777 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 TSPAN6O43657 245 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 CALCAP01258 141 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 GKP32189 559 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 BLKP51451 505 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 NNTQ13423 1086 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 HLTFQ14527 1009 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 C14orf28Q4W4Y0 310 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 LRRC73Q5JTD7 316 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 RABGAP1LQ5R372 815 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 CNNM4Q6P4Q7 775 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 C22orf39Q6P5X5 142 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 ENPP7Q6UWV6 458 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 TMEM135Q86UB9 458 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 NRSN1Q8IZ57 195 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 NLGN4XQ8N0W4 816 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 CCDC150Q8NCX0 1101 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 NLGN4YQ8NFZ3 816 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 TFAP2BQ92481 460 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 DHX58Q96C10 678 aa15.61■□□□□ 0.09
CLSTN3-216ENST00000545663 RPRD1AQ96P16 312 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms