RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SPATA32Q96LK8 384 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 GFM1Q96RP9 751 aaKnown RBP14.97□□□□□ -0.01
RTN3-214ENST00000545432 NPY6RQ99463 290 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 SLC13A1Q9BZW2 595 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 STRADBQ9C0K7 418 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 EPB41L5Q9HCM4 733 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 RMND1Q9NWS8 449 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 RRN3Q9NYV6 651 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 SEPT10Q9P0V9 454 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 SEPT3Q9UH03 358 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 APPL1Q9UKG1 709 aa14.97□□□□□ -0.01
RTN3-214ENST00000545432 SPTAN1Q13813 2472 aaKnown RBP14.97□□□□□ -0.01
RTN3-214ENST00000545432 SCN8AQ9UQD0 1980 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 TRIM49BA6NDI0 452 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 DAB1O75553 588 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 LETM1O95202 739 aaPredicted RBP14.96□□□□□ -0.01
RTN3-214ENST00000545432 HGFP14210 728 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 PNLIPP16233 465 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 CR2P20023 1033 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 CD82P27701 267 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 PEX5P50542 639 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 CCNHP51946 323 aaPredicted RBP14.96□□□□□ -0.01
RTN3-214ENST00000545432 CCL7P80098 99 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 ARF5P84085 180 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 SERINC3Q13530 473 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 ZNF805Q5CZA5 627 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 OGFOD3Q6PK18 319 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 GPR156Q8NFN8 814 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 OR7D4Q8NG98 312 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 CCDC74AQ96AQ1 378 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 SLC12A9Q9BXP2 914 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 GTPBP4Q9BZE4 634 aaKnown RBP14.96□□□□□ -0.01
RTN3-214ENST00000545432 SIK2Q9H0K1 926 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 LRRN3Q9H3W5 708 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 WDCPQ9H6R7 721 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 PIGVQ9NUD9 493 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.01
RTN3-214ENST00000545432 UNC13CQ8NB66 2214 aa14.96□□□□□ -0.02
RTN3-214ENST00000545432 USP9XQ93008 2570 aaPredicted RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 TEX15Q9BXT5 2789 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 SYNJ2BP-COX16A0A087WUM0 186 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 M0QYT0 321 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 RPLP0P05388 317 aaKnown RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 CELA2BP08218 269 aaPredicted RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 EIF4A3P38919 411 aaKnown RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 BLKP51451 505 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 HK3P52790 923 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 THOP1P52888 689 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 MARSP56192 900 aaKnown RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 FOXK1P85037 733 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 PPARDQ03181 441 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 NME3Q13232 169 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 ELOCQ15369 112 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 MANEAQ5SRI9 462 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 C11orf57Q6ZUT1 292 aaPredicted RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 BNIPLQ7Z465 357 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 JAMLQ86YT9 394 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 KYQ8NBH2 561 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 TP53I13Q8NBR0 393 aaPredicted RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 ARHGEF26Q96DR7 871 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 PPP1R13BQ96KQ4 1090 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 PSMG3-AS1Q96PY0 264 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 EPAS1Q99814 870 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 EDEM3Q9BZQ6 932 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 TKTL2Q9H0I9 626 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 ACP6Q9NPH0 428 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 MBNL1Q9NR56 388 aaKnown RBP14.95□□□□□ -0.02
RTN3-214ENST00000545432 COX16Q9P0S2 106 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 GGT7Q9UJ14 662 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 TUBD1Q9UJT1 453 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 LOXL2Q9Y4K0 774 aa14.95□□□□□ -0.02
RTN3-214ENST00000545432 PRAMEF33A0A0G2JMD5 474 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 BECN2A8MW95 431 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 C9orf172C9J069 976 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 PRAMEF10O60809 474 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 GRAP2O75791 330 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 ENDOD1O94919 500 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 ALPIP09923 528 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 GNA15P30679 374 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 OR1E1P30953 314 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 KRT85P78386 507 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 SLC6A3Q01959 620 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 PNOCQ13519 176 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 FAXCQ5TGI0 409 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 FAM183BPQ6ZVS7 135 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 ENOSF1Q7L5Y1 443 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 ZFAND4Q86XD8 727 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 SLITRK4Q8IW52 837 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 TRIM59Q8IWR1 403 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 ZSCAN1Q8NBB4 408 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 ZNF564Q8TBZ8 553 aaPredicted RBP14.94□□□□□ -0.02
RTN3-214ENST00000545432 SCG3Q8WXD2 468 aaKnown RBP14.94□□□□□ -0.02
RTN3-214ENST00000545432 FOXP3Q9BZS1 431 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 MPP6Q9NZW5 540 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 FOXJ2Q9P0K8 574 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 HECAQ9UBI9 543 aaPredicted RBP14.94□□□□□ -0.02
RTN3-214ENST00000545432 PISDQ9UG56 409 aa14.94□□□□□ -0.02
RTN3-214ENST00000545432 TMEM110-MUSTN1A8MSY1 372 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 THAP12O43422 761 aa14.93□□□□□ -0.02
RTN3-214ENST00000545432 F9P00740 461 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms