RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PPM1KQ8N3J5 372 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 Q8N9G6 341 aaPredicted RBP9.55□□□□□ -0.88
CHD4-212ENST00000545083 DCAF4L2Q8NA75 395 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 PMEPA1Q969W9 287 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 TSACCQ96A04 125 aaPredicted RBP9.55□□□□□ -0.88
CHD4-212ENST00000545083 SLC2A13Q96QE2 648 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 HEPHQ9BQS7 1158 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 SIK2Q9H0K1 926 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 THAP9Q9H5L6 903 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 ZNF71Q9NQZ8 489 aaPredicted RBP9.55□□□□□ -0.88
CHD4-212ENST00000545083 ANAPC2Q9UJX6 822 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 GPR34Q9UPC5 381 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 HPSEQ9Y251 543 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 ACTL7AQ9Y615 435 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 RNF215Q9Y6U7 377 aa9.55□□□□□ -0.88
CHD4-212ENST00000545083 RP1L1Q8IWN7 2480 aaPredicted RBP9.55□□□□□ -0.88
CHD4-212ENST00000545083 SDK2Q58EX2 2172 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 C16orf96A6NNT2 1141 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 GRAP2O75791 330 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 ADCY5O95622 1261 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 CCL4P13236 92 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 CD82P27701 267 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 EIF4A3P38919 411 aaKnown RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 DNA2P51530 1060 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 CCNHP51946 323 aaPredicted RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 HK3P52790 923 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 YPEL5P62699 121 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 NME3Q13232 169 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 PTK2BQ14289 1009 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 ALG11Q2TAA5 492 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 CARD16Q5EG05 197 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 OTUD1Q5VV17 481 aaPredicted RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 RRAGAQ7L523 313 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 TFAP2DQ7Z6R9 452 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 ZSCAN30Q86W11 494 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 HID1Q8IV36 788 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 ARHGEF19Q8IW93 802 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 FSTL5Q8N475 847 aaPredicted RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 TP53I13Q8NBR0 393 aaPredicted RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 GPR156Q8NFN8 814 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 LMO3Q8TAP4 145 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 NKD1Q969G9 470 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 NT5C1BQ96P26 610 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 TRIM62Q9BVG3 475 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 SRRTQ9BXP5 876 aaKnown RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 EDEM3Q9BZQ6 932 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 SEMA6CQ9H3T2 930 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 LRRC4CQ9HCJ2 640 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 ACP6Q9NPH0 428 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 MPP6Q9NZW5 540 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 TUBD1Q9UJT1 453 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 DOLKQ9UPQ8 538 aa9.54□□□□□ -0.88
CHD4-212ENST00000545083 FCF1Q9Y324 198 aaKnown RBP9.54□□□□□ -0.88
CHD4-212ENST00000545083 LRBAP50851 2863 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 CSMD1Q96PZ7 3565 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 M0QYT0 321 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 NEMP1O14524 444 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 AREL1O15033 823 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 SLC16A3O15427 465 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 MTSS1O43312 755 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 MMP20O60882 483 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 CD160O95971 181 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 LIFP15018 202 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 ITIH2P19823 946 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 FMO5P49326 533 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 SERPINH1P50454 418 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 PMS1P54277 932 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 ARF5P84085 180 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 DNM1Q05193 864 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 PDCLQ13371 301 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 ELOCQ15369 112 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 LRRC73Q5JTD7 316 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 PHF19Q5T6S3 580 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 LVRNQ6Q4G3 990 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 SPRED1Q7Z699 444 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 PCDH20Q8N6Y1 951 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 OR6K2Q8NGY2 324 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 CCDC47Q96A33 483 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 MIB2Q96AX9 1013 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 KREMEN1Q96MU8 473 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 MED15Q96RN5 788 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 CMKLR1Q99788 373 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 TM6SF2Q9BZW4 377 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 CEP44Q9C0F1 390 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 ZDHHC6Q9H6R6 413 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 UPF2Q9HAU5 1272 aaKnown RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 TMPRSS4Q9NRS4 437 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 IGSF5Q9NSI5 407 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 PLEKHB1Q9UF11 243 aaPredicted RBP9.53□□□□□ -0.88
CHD4-212ENST00000545083 USP25Q9UHP3 1055 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 APPL1Q9UKG1 709 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 RCOR1Q9UKL0 485 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 DAAM1Q9Y4D1 1078 aa9.53□□□□□ -0.88
CHD4-212ENST00000545083 DRGXA6NNA5 263 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 STMND1H3BQB6 276 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 F13A1P00488 732 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms