RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 WDR59Q6PJI9 974 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 DPY19L3Q6ZPD9 716 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 ERN2Q76MJ5 926 aaKnown RBP16.5■□□□□ 0.23
DDX55-212ENST00000544738 APTXQ7Z2E3 356 aaKnown RBP16.5■□□□□ 0.23
DDX55-212ENST00000544738 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 AOPEPQ8N6M6 819 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 ISG20Q96AZ6 181 aaKnown RBP16.5■□□□□ 0.23
DDX55-212ENST00000544738 TBC1D31Q96DN5 1066 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 HEPHQ9BQS7 1158 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 HDAC8Q9BY41 377 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 RAB6CQ9H0N0 254 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 ABCG4Q9H172 646 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 MAGEH1Q9H213 219 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 HSD3B7Q9H2F3 369 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 TNKS2Q9H2K2 1166 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 TMEM248Q9NWD8 314 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 HPCAL4Q9UM19 191 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 MYO6Q9UM54 1294 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 FLNCQ14315 2725 aa16.5■□□□□ 0.23
DDX55-212ENST00000544738 SMTNL1A8MU46 457 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 ZNF821O75541 412 aaPredicted RBP16.49■□□□□ 0.23
DDX55-212ENST00000544738 LEFTY1O75610 366 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 LRIG2O94898 1065 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 GJB6O95452 261 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 DNA2P51530 1060 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 HDAC4P56524 1084 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 NFKB2Q00653 900 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 CARD16Q5EG05 197 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 CDCP2Q5VXM1 449 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 DNAJC24Q6P3W2 148 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 CCDC81Q6ZN84 652 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 MON1BQ7L1V2 547 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 SLFN11Q7Z7L1 901 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 NLRP14Q86W24 1093 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 SLC25A45Q8N413 288 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 EXD3Q8N9H8 876 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 CHST14Q8NCH0 376 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 GRIN3AQ8TCU5 1115 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 ARRDC3Q96B67 414 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 BPIFA3Q9BQP9 254 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 ASCL3Q9NQ33 180 aa16.49■□□□□ 0.23
DDX55-212ENST00000544738 TP53BP1Q12888 1972 aaPredicted RBP16.48■□□□□ 0.23
DDX55-212ENST00000544738 FAM72CH0Y354 149 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 PCDH8O95206 1070 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 MYF5P13349 255 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 RBMS1P29558 406 aaKnown RBP16.48■□□□□ 0.23
DDX55-212ENST00000544738 NEK3P51956 506 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 ZNF143P52747 638 aaPredicted RBP16.48■□□□□ 0.23
DDX55-212ENST00000544738 AIF1P55008 147 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 ARF5P84085 180 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 POLD3Q15054 466 aaPredicted RBP16.48■□□□□ 0.23
DDX55-212ENST00000544738 EFHC2Q5JST6 749 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 FAM72AQ5TYM5 149 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 FAM72DQ6L9T8 149 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 HORMAD1Q86X24 394 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 FAM72BQ86X60 149 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 CCDC185Q8N715 623 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 FAM174AQ8TBP5 190 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 ARHGEF2Q92974 986 aaKnown RBP16.48■□□□□ 0.23
DDX55-212ENST00000544738 KLHDC7BQ96G42 594 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 DNAI1Q9UI46 699 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 WASF2Q9Y6W5 498 aa16.48■□□□□ 0.23
DDX55-212ENST00000544738 A0A1W2PQU0 124 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ZSCAN5CA6NGD5 496 aaPredicted RBP16.47■□□□□ 0.23
DDX55-212ENST00000544738 FFAR2O15552 330 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 RAMP2O60895 175 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ITGB7P26010 798 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 AKT2P31751 481 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 L1CAMP32004 1257 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ACVRL1P37023 503 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 CCNHP51946 323 aaPredicted RBP16.47■□□□□ 0.23
DDX55-212ENST00000544738 ZSCAN23Q3MJ62 389 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 FILIP1LQ4L180 1135 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 C3orf38Q5JPI3 329 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ACAD10Q6JQN1 1059 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 SCYL2Q6P3W7 929 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ZNF574Q6ZN55 896 aaPredicted RBP16.47■□□□□ 0.23
DDX55-212ENST00000544738 ATG14Q6ZNE5 492 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 ZSCAN30Q86W11 494 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 FEM1CQ96JP0 617 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 CNPY3Q9BT09 278 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 RTN4Q9NQC3 1192 aaKnown RBP16.47■□□□□ 0.23
DDX55-212ENST00000544738 NDFIP2Q9NV92 336 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 TMEM63CQ9P1W3 806 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 SATB2Q9UPW6 733 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 FCF1Q9Y324 198 aaKnown RBP16.47■□□□□ 0.23
DDX55-212ENST00000544738 NOTCH2Q04721 2471 aa16.47■□□□□ 0.23
DDX55-212ENST00000544738 TCRBV5S1A1TA0A578 114 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 TERTO14746 1132 aaKnown RBP16.46■□□□□ 0.23
DDX55-212ENST00000544738 SLC31A1O15431 190 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 CD160O95971 181 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 TNFAIP3P21580 790 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 HNRNPA2B1P22626 353 aaKnown RBP16.46■□□□□ 0.23
DDX55-212ENST00000544738 EPHB2P29323 1055 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 SNRPD1P62314 119 aaKnown RBP16.46■□□□□ 0.23
DDX55-212ENST00000544738 ZNF284Q2VY69 593 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 KIAA1161Q6NSJ0 714 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 DCUN1D2Q6PH85 259 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms