RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 FDPSP14324 419 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 FOSL1P15407 271 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 GOT1P17174 413 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 POLR2EP19388 210 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 C5AR1P21730 350 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TGM2P21980 687 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TPP2P29144 1249 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CORO1AP31146 461 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SLC5A2P31639 672 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CACNA2D1P54289 1103 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 GYS2P54840 703 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 ADPRHP54922 357 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 GFRA1P56159 465 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 POLE2P56282 527 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SUMO1P63165 101 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 MAP4K2Q12851 820 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SPIDRQ14159 915 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CLCA4Q14CN2 919 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SF1Q15637 639 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CST6Q15828 149 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 MPPE1Q53F39 396 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SETMARQ53H47 684 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 C10orf120Q5SQS8 335 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TMEM215Q68D42 235 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3GQ6DHY5 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 HIST2H2BCQ6DN03 193 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3CQ6IPX1 549 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 ZCCHC8Q6NZY4 707 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CRTC3Q6UUV7 619 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CHST9Q7L1S5 443 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 KCNK18Q7Z418 384 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SPATS2Q86XZ4 545 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 JAMLQ86YT9 394 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TBC1D3Q8IZP1 549 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 FBXO39Q8N4B4 442 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF276Q8N554 614 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 C4orf32Q8N8J7 132 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SORCS1Q8WY21 1168 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 NAT6Q93015 286 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 MIB2Q96AX9 1013 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 TMEM159Q96B96 161 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 C1orf159Q96HA4 380 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CATSPER2Q96P56 530 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 IPO9Q96P70 1041 aaKnown RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 KCNK16Q96T55 309 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 REEP2Q9BRK0 252 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 FUCA2Q9BTY2 467 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SLC12A9Q9BXP2 914 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 B3GNT5Q9BYG0 378 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 STRADBQ9C0K7 418 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 NEUROG2Q9H2A3 272 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 ZHX3Q9H4I2 956 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 PNPLA8Q9NP80 782 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 INTS13Q9NVM9 706 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SIX4Q9UIU6 781 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 GGA2Q9UJY4 613 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 VPS4AQ9UN37 437 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 SCML2Q9UQR0 700 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 GPR55Q9Y2T6 319 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 PCDHA5Q9Y5H7 936 aa4.23□□□□□ -1.73
SNHG1-220ENST00000544550 UBR5O95071 2799 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-220ENST00000544550 CITO14578 2027 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 PI4KAP42356 2102 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 PTPRQQ9UMZ3 2332 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 A0A087X0B3 334 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 NPHP3-ACAD11A0A0J9YXS1 232 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 A0A1W2PNU3 283 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 A0A1W2PQ27 194 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 A0A1W2PQ64 194 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 A0A1W2PQC6 194 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 EME2A4GXA9 379 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 PP2D1A8MPX8 630 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 K7ESM1 405 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CLDN5O00501 218 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 WNT9AO14904 365 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 AURKAO14965 403 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 NOBOXO60393 691 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF205O95201 554 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 LATS1O95835 1130 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CPP00450 1065 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ASLP04424 464 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 FAM200BP0CF97 657 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 VAV1P15498 845 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 HLA-FP30511 346 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 SLC8A1P32418 973 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 NOP2P46087 812 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 HNRNPKP61978 463 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF177Q13360 481 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 KCNJ12Q14500 433 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 NR0B2Q15466 257 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 BMT2Q1RMZ1 405 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 DPY19L1Q2PZI1 675 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 HNRNPA1L2Q32P51 320 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 SLC35F1Q5T1Q4 408 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 MBLAC2Q68D91 279 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 RAB11FIP2Q7L804 512 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 EFL1Q7Z2Z2 1120 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ADIPOR2Q86V24 386 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms