RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 OR6K2Q8NGY2 324 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 VCPIP1Q96JH7 1222 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 C1QTNF2Q9BXJ5 285 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 TTYH3Q9C0H2 523 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 RAB6CQ9H0N0 254 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 GPR27Q9NS67 375 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 AK5Q9Y6K8 562 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 LOC400499M0QZD8 3231 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
RTN3-213ENST00000543552 ADAMTS20P59510 1910 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 SPTY2D1-AS1A0A0U1RR47 76 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 IGLON5A6NGN9 336 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 EIF3CLB5ME19 914 aaKnown RBP13.31□□□□□ -0.28
RTN3-213ENST00000543552 RNF103O00237 685 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 TOR1BO14657 336 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 SCAMP1O15126 338 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 CREB3O43889 395 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 CD160O95971 181 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 CSF2P04141 144 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 GP1BAP07359 652 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 CKMT1AP12532 417 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 NME1P15531 152 aaKnown RBP13.31□□□□□ -0.28
RTN3-213ENST00000543552 XPAP23025 273 aaPredicted RBP13.31□□□□□ -0.28
RTN3-213ENST00000543552 RHOAP61586 193 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 PTK2BQ14289 1009 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 GRM3Q14832 879 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 RTP5Q14D33 572 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 ACAD10Q6JQN1 1059 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 PDZD3Q86UT5 571 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 AOPEPQ8N6M6 819 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 DCBLD1Q8N8Z6 715 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 FAM181AQ8N9Y4 354 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 BTN2A2Q8WVV5 523 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 HNRNPLLQ8WVV9 542 aaKnown RBP13.31□□□□□ -0.28
RTN3-213ENST00000543552 BAP1Q92560 729 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 KLHL32Q96NJ5 620 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 EIF3CQ99613 913 aaKnown RBP13.31□□□□□ -0.28
RTN3-213ENST00000543552 NCAPGQ9BPX3 1015 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 PARVAQ9NVD7 372 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 MFHAS1Q9Y4C4 1052 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 CSNK1G3Q9Y6M4 447 aa13.31□□□□□ -0.28
RTN3-213ENST00000543552 ARID1BQ8NFD5 2236 aaPredicted RBP13.31□□□□□ -0.28
RTN3-213ENST00000543552 DOCK9Q9BZ29 2069 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 POM121BA6NF01 834 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 WASH4PA8MWX3 477 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 RRP8O43159 456 aaKnown RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 ABL2P42684 1182 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 ABCG1P45844 678 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 THOP1P52888 689 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 TPI1P60174 286 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 INSM1Q01101 510 aaPredicted RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 ELP6Q0PNE2 266 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 SERINC3Q13530 473 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 PDE1CQ14123 709 aaPredicted RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 FGL2Q14314 439 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 CFAP58Q5T655 872 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 ATXN7L2Q5T6C5 722 aaPredicted RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 ZCCHC8Q6NZY4 707 aaKnown RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 LEKR1Q6ZMV7 388 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 LRRC69Q6ZNQ3 347 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 TMC6Q7Z403 805 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 TTC7BQ86TV6 843 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 UMODL1-AS1Q8N2C9 162 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 ZNF548Q8NEK5 533 aaPredicted RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 CXorf40AQ8TE69 158 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 BMFQ96LC9 184 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 DEPDC7Q96QD5 511 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 DKK3Q9UBP4 350 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 FZD10Q9ULW2 581 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 ACTL7AQ9Y615 435 aa13.3□□□□□ -0.28
RTN3-213ENST00000543552 URB1O60287 2271 aaKnown RBP13.3□□□□□ -0.28
RTN3-213ENST00000543552 SMG1Q96Q15 3661 aaKnown RBP13.29□□□□□ -0.28
RTN3-213ENST00000543552 TCRBV5S1A1TA0A578 114 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 RASA4BC9J798 803 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 AREL1O15033 823 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 RAD51BO15315 384 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 RASA4O43374 803 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 TM7SF2O76062 418 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 TNFAIP3P21580 790 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 GKP32189 559 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 ACTN2P35609 894 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 NDST2P52849 883 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 RPL7AP62424 266 aaKnown RBP13.29□□□□□ -0.28
RTN3-213ENST00000543552 YPEL5P62699 121 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 SEMG2Q02383 582 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 TYRO3Q06418 890 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 FZD2Q14332 565 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 NCAPHQ15003 741 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 APTXQ7Z2E3 356 aaKnown RBP13.29□□□□□ -0.28
RTN3-213ENST00000543552 DNAAF5Q86Y56 855 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 PYROXD2Q8N2H3 581 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 HCAR2Q8TDS4 363 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 GLMNQ92990 594 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 HMCESQ96FZ2 354 aa13.29□□□□□ -0.28
RTN3-213ENST00000543552 APOLD1Q96LR9 279 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms