RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, human

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7A-215	ENST00000543155	POMP	Q9Y244	141 aa		18.83	■□□□□ 0.61
COPS7A-215	ENST00000543155	FRMPD3	Q5JV73	1810 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	SEPT4	O43236	478 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	BUD23	O43709	281 aa	Known RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	NPHS1	O60500	1241 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	SKAP2	O75563	359 aa	Predicted RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	ASGR1	P07306	291 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	LINGO3	P0C6S8	592 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	EPHA3	P29320	983 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	SERPINB5	P36952	375 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	MTTP	P55157	894 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	MLLT6	P55198	1093 aa	Predicted RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	POU4F1	Q01851	419 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	DLG1	Q12959	904 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	KDELC1	Q6UW63	502 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	KIAA0408	Q6ZU52	694 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	SETD3	Q86TU7	594 aa	Predicted RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	ZNF598	Q86UK7	904 aa	Known RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	CCDC124	Q96CT7	223 aa	Known RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	MRPL57	Q9BQC6	102 aa	Known RBP	18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	FBXO5	Q9UKT4	447 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	TLR6	Q9Y2C9	796 aa		18.83	■□□□□ 0.6
COPS7A-215	ENST00000543155	HEATR9	A2RTY3	570 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SORBS2	O94875	1100 aa	Known RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SNUPN	O95149	360 aa	Known RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	OR4Q2	P0C623	313 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	ADSL	P30566	484 aa	Predicted RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	PPARG	P37231	505 aa	Predicted RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SLC12A2	P55011	1212 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	WNT3A	P56704	352 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	NSUN2	Q08J23	767 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	CRHR2	Q13324	411 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	PIK3R6	Q5UE93	754 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	MSANTD2	Q6P1R3	559 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	C16orf89	Q6UX73	402 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	HPS6	Q86YV9	775 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	NUF2	Q9BZD4	464 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	ATXN3L	Q9H3M9	355 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	OSER1	Q9NX31	292 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SCOC	Q9UIL1	159 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SCML2	Q9UQR0	700 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	MRPL42	Q9Y6G3	142 aa	Known RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	PCNT	O95613	3336 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	RGSL1	A5PLK6	1076 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SLC2A3	P11169	496 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	TAS2R39	P59534	338 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	PCSK7	Q16549	785 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	TSTD2	Q5T7W7	516 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	NEPRO	Q6NW34	567 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	KDELC2	Q7Z4H8	507 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	SNX32	Q86XE0	403 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	UMODL1-AS1	Q8N2C9	162 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	RP9	Q8TA86	221 aa	Known RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	GABPB2	Q8TAK5	448 aa	Predicted RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	CALML6	Q8TD86	181 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	FATE1	Q969F0	183 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	PPP1R36	Q96LQ0	422 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	RANBP9	Q96S59	729 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	ZCWPW1	Q9H0M4	648 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	VCX3B	Q9H321	246 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	ZNF385D	Q9H6B1	395 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	NOL6	Q9H6R4	1146 aa	Known RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	ARNT2	Q9HBZ2	717 aa		18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	ABI2	Q9NYB9	513 aa	Predicted RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	PRPF19	Q9UMS4	504 aa	Known RBP	18.82	■□□□□ 0.6
COPS7A-215	ENST00000543155	MAGEA13P	A6NCF6	341 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	CPB1	P15086	417 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	NDST2	P52849	883 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	INHBE	P58166	350 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	CDC16	Q13042	620 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	HNRNPD	Q14103	355 aa	Known RBP	18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	FAM26D	Q5JW98	314 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	TCHHL1	Q5QJ38	904 aa	Predicted RBP	18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	MON1A	Q86VX9	555 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	DCP1B	Q8IZD4	617 aa	Known RBP	18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	IMP4	Q96G21	291 aa	Known RBP	18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	SLC39A13	Q96H72	371 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	NR1H4	Q96RI1	486 aa	Predicted RBP	18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	ATP13A1	Q9HD20	1204 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	CLIC5	Q9NZA1	410 aa		18.81	■□□□□ 0.6
COPS7A-215	ENST00000543155	PEX11B	O96011	259 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	RHOQ	P17081	205 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	SP100	P23497	879 aa	Predicted RBP	18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	NUDT2	P50583	147 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	RENBP	P51606	427 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	DNAJB13	P59910	316 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	HERC3	Q15034	1050 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	KCNA10	Q16322	511 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	PIWIL4	Q7Z3Z4	852 aa	Known RBP	18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	ARHGAP18	Q8N392	663 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	CCNYL1	Q8N7R7	359 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	HEXDC	Q8WVB3	486 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	GATA6	Q92908	595 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	NCKIPSD	Q9NZQ3	722 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	DLGAP2	Q9P1A6	1054 aa		18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	MYCN	P04198	464 aa	Predicted RBP	18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	ATP5F1	P24539	256 aa	Predicted RBP	18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	SERPINH1	P50454	418 aa	Known RBP	18.8	■□□□□ 0.6
COPS7A-215	ENST00000543155	TBX4	P57082	545 aa		18.8	■□□□□ 0.6

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