RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 SLC45A4Q5BKX6 768 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 ZNF805Q5CZA5 627 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 RALGPS1Q5JS13 557 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 ALG1LQ6GMV1 187 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 FAM124AQ86V42 546 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 ZC3H10Q96K80 434 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 HDAC8Q9BY41 377 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 POLR1EQ9GZS1 481 aaKnown RBP17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 BTBD1Q9H0C5 482 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 SGK2Q9HBY8 427 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 DYRK4Q9NR20 520 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 ATP8A1Q9Y2Q0 1164 aa17.32■□□□□ 0.36
RABGGTA-203ENST00000543002 PLK4O00444 970 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 SLC7A4O43246 635 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 GJB3O75712 270 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 ATP1A1P05023 1023 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 HLA-DQB2P05538 268 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 RBP3P10745 1247 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 CXCR5P32302 372 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 ACSL1P33121 698 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 GNG11P61952 73 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 NHLH1Q02575 133 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 CCDC15Q0P6D6 951 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 PLK5Q496M5 336 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 HS1BP3Q53T59 392 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 NCEH1Q6PIU2 408 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 ERN2Q76MJ5 926 aaKnown RBP17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 CNTD1Q8N815 330 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 ZNF641Q96N77 438 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 KLHL32Q96NJ5 620 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 FAM118BQ9BPY3 351 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 DUSP15Q9H1R2 295 aaPredicted RBP17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 SUV39H2Q9H5I1 410 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 ATP13A3Q9H7F0 1226 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 SEPT10Q9P0V9 454 aa17.31■□□□□ 0.36
RABGGTA-203ENST00000543002 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 TTC24A2A3L6 582 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 CEP104O60308 925 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 NDUFS2O75306 463 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 PIGNO95427 931 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 CES1P23141 567 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 PTPN3P26045 913 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 SERPINA4P29622 427 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 RPL6Q02878 288 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 ITKQ08881 620 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 WASHC5Q12768 1159 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 TEX44Q53QW1 395 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 SPDYCQ5MJ68 293 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 PIP5KL1Q5T9C9 394 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 AGBL4Q5VU57 503 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 PMS2CLQ68D20 193 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 PRR23BQ6ZRT6 265 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 LPCAT2Q7L5N7 544 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 CAMK1DQ8IU85 385 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 CDKL3Q8IVW4 592 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 C17orf53Q8N3J3 647 aaPredicted RBP17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 HCAR2Q8TDS4 363 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 HTR3CQ8WXA8 447 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 PBKQ96KB5 322 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 NSMCE3Q96MG7 304 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 SEMA3CQ99985 751 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 GPR174Q9BXC1 333 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 NOD2Q9HC29 1040 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 DKK3Q9UBP4 350 aa17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 R3HDM2Q9Y2K5 976 aaKnown RBP17.3■□□□□ 0.36
RABGGTA-203ENST00000543002 BCLAF3A2AJT9 711 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 C16orf96A6NNT2 1141 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 PROB1E7EW31 1015 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 ZNF189O75820 626 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 RHOBTB1O94844 696 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 SEMA4FO95754 770 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 RBL1P28749 1068 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 NEK3P51956 506 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 ADPRHP54922 357 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 DSC2Q02487 901 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 BCL2L1Q07817 233 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 ELF2Q15723 593 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 DARS2Q6PI48 645 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 PARS2Q7L3T8 475 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 ADAT2Q7Z6V5 191 aaKnown RBP17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 SUMF1Q8NBK3 374 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 CADM4Q8NFZ8 388 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 OR14C36Q8NHC7 312 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 SLC35B2Q8TB61 432 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 ARRDC2Q8TBH0 407 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 MAIP1Q8WWC4 291 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 TEKT5Q96M29 485 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 AGAP3Q96P47 875 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 WDR24Q96S15 920 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 VAT1Q99536 393 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 FERMT1Q9BQL6 677 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 CEP41Q9BYV8 373 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 FRMD8P1Q9BZ68 369 aaPredicted RBP17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 PCED1AQ9H1Q7 454 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 KDM4CQ9H3R0 1056 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 RAB23Q9ULC3 237 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 SNX12Q9UMY4 172 aa17.29■□□□□ 0.36
RABGGTA-203ENST00000543002 SMG5Q9UPR3 1016 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms