RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 EFCAB14O75071 495 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 UBOX5O94941 541 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 AVPR1AP37288 418 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 SERPINH1P50454 418 aaKnown RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 ARSDP51689 593 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 NAB1Q13506 487 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 PTPRRQ15256 657 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 CHI3L2Q15782 390 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 RNF219Q5W0B1 726 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 POTEHQ6S545 545 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 LDB1Q86U70 411 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 TSSK1BQ9BXA7 367 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 LRRC3Q9BY71 257 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 ARNT2Q9HBZ2 717 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 MKS1Q9NXB0 559 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 PLK2Q9NYY3 685 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 SLC39A10Q9ULF5 831 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 SPTBN5Q9NRC6 3674 aaKnown RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 A0A1W2PRU2 124 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 OR51F1A6NGY5 319 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 ARHGEF15O94989 841 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 RHOCP08134 193 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 SPRP35270 261 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 PPM1AP35813 382 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 SLC1A2P43004 574 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 BST1Q10588 318 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF177Q13360 481 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 FRG1Q14331 258 aaKnown RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 TMEM240Q5SV17 173 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 PDPK2PQ6A1A2 396 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 LILRA6Q6PI73 481 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 ZC3HC1Q86WB0 502 aaKnown RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 TMC8Q8IU68 726 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 OR13J1Q8NGT2 312 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 UNKQ9C0B0 810 aaKnown RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 POLR1EQ9GZS1 481 aaKnown RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 MAGEH1Q9H213 219 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 SUDS3Q9H7L9 328 aaPredicted RBP17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 CLEC4EQ9ULY5 219 aa17.44■□□□□ 0.38
TMEM50B-210ENST00000542230 A0A0U1RQS6 177 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 CCL16O15467 120 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 PHGDHO43175 533 aaKnown RBP17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 TBL1XO60907 577 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 OBSL1O75147 1896 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 CLDN11O75508 207 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 CD160O95971 181 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 C8AP07357 584 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 CCR2P41597 374 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 NUDCD3Q8IVD9 361 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 SPATA6LQ8N4H0 392 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 CARNMT1Q8N4J0 409 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 C10orf82Q8WW14 230 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 MOCOSQ96EN8 888 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 TCF25Q9BQ70 676 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 ACSS2Q9NR19 701 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 ATXN2Q99700 1313 aaKnown RBP17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 A0A1B0GVM2 712 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 LOC285095A0A1B0GVY8 99 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 TCAF2A6NFQ2 919 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 PLIN3O60664 434 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 RFPL2O75678 378 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 HAUS5O94927 633 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 C1RP00736 705 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 BPGMP07738 259 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 SCTRP47872 440 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 SCNN1BP51168 640 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 OXCT1P55809 520 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 TMPRSS15P98073 1019 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 TNK2Q07912 1038 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF470Q6ECI4 717 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 ZNF449Q6P9G9 518 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 CLP1Q92989 425 aaKnown RBP17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 MUC3BQ9H195 1237 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 VPS45Q9NRW7 570 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 SIRPGQ9P1W8 387 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 KLHL14Q9P2G3 628 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 ARL5AQ9Y689 179 aa17.43■□□□□ 0.38
TMEM50B-210ENST00000542230 A0A096LPK6 155 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 KDELR3O43731 214 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 C2P06681 752 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 MYOGP15173 224 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 MAGEA12P43365 314 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 ARF5P84085 180 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 CYTH1Q15438 398 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 SLC41A1Q8IVJ1 513 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 CORO1BQ9BR76 489 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 UBA2Q9UBT2 640 aaPredicted RBP17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 CHKBQ9Y259 395 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 TBC1D30Q9Y2I9 924 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 MTF2Q9Y483 593 aaPredicted RBP17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 MYOFQ9NZM1 2061 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 AP3B1O00203 1094 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 MT-CO1P00395 513 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 CKMP06732 381 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 FASTKD1Q53R41 847 aaKnown RBP17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 ACBD5Q5T8D3 534 aaPredicted RBP17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 CEP97Q8IW35 865 aa17.42■□□□□ 0.38
TMEM50B-210ENST00000542230 KREMEN2Q8NCW0 462 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms