RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TIMM44O43615 452 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 TRMUO75648 421 aaKnown RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 AHSGP02765 367 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 HNRNPCP07910 306 aaKnown RBP eCLIP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 SBK3P0C264 359 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 CD68P34810 354 aaPredicted RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 BRCC3P46736 316 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 STT3AP46977 705 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ARPP19P56211 112 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ANO4Q32M45 955 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 TRIM67Q6ZTA4 783 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 KCNN1Q92952 543 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 WNT8BQ93098 351 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 RPL10LQ96L21 214 aaKnown RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 DRC3Q9H069 523 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 POMKQ9H5K3 350 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 RAB26Q9ULW5 256 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ZNF711Q9Y462 761 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 V9GYQ6 96 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ARHGAP10A1A4S6 786 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 TCAF2A6NFQ2 919 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 TMEM114B3SHH9 223 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 CCL22O00626 93 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 AURKAO14965 403 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 AP2A1O95782 977 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 CLIC3O95833 236 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 PSEN2P49810 448 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 DBN1Q16643 649 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 GEN1Q17RS7 908 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 NOMO2Q5JPE7 1267 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 SDHAF4Q5VUM1 108 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ITPRIPL1Q6GPH6 555 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ESRP1Q6NXG1 681 aaKnown RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 CLEC20AQ6ZU45 233 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 LSMEM2Q8N112 164 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 RYBPQ8N488 228 aaPredicted RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 CENPIQ92674 756 aaPredicted RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 PCED1BQ96HM7 432 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 SYT17Q9BSW7 474 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 DUSP16Q9BY84 665 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 GIMAP2Q9UG22 337 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 TMCO1Q9UM00 188 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 PDLIM1O00151 329 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 SUPT3HO75486 399 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 PRDX6P30041 224 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 NOS2P35228 1153 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 SLC12A2P55011 1212 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 METTL21CQ5VZV1 264 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ZYG11AQ6WRX3 759 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 CYS1Q717R9 158 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 HERC6Q8IVU3 1022 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ADCY4Q8NFM4 1077 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 FBRSL1Q9HCM7 1045 aaKnown RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 OR12D3Q9UGF7 316 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 NOD1Q9Y239 953 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 FNDC3AQ9Y2H6 1198 aaKnown RBP15.49■□□□□ 0.07
CNOT9-208ENST00000542068 ACOT9Q9Y305 439 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 RNF11Q9Y3C5 154 aa15.49■□□□□ 0.07
CNOT9-208ENST00000542068 LCTP09848 1927 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 I6L893 689 aaPredicted RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 GABRB3P28472 473 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 TAF1CQ15572 869 aaPredicted RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 CLEC6AQ6EIG7 209 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 CNSTQ6PJW8 725 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ARHGAP36Q6ZRI8 547 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ZDHHC17Q8IUH5 632 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ZFRQ96KR1 1074 aaKnown RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ZBTB26Q9HCK0 441 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 EGFL7Q9UHF1 273 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 DMTF1Q9Y222 760 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 A0A0J9YVX5 310 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 C17orf102A2RUQ5 167 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 TMX2-CTNND1H3BSU7 103 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 MSI1O43347 362 aaKnown RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 SLC4A1P02730 911 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 SLC35E2BP0CK96 405 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ADRA1BP35368 520 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 MAP7D1Q3KQU3 841 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 LDB1Q86U70 411 aaPredicted RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 IFNEQ86WN2 208 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ZNF786Q8N393 782 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 HSFY1Q96LI6 401 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 TNFRSF12AQ9NP84 129 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 BCAP29Q9UHQ4 241 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 TFPTP0C1Z6 253 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 YWHAQP27348 245 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 GLUD2P49448 558 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ARL13BQ3SXY8 428 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 TMEM259Q4ZIN3 620 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 IQSEC1Q6DN90 963 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ZFP1Q6P2D0 407 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 PDZD4Q76G19 769 aaPredicted RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 TMEM135Q86UB9 458 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 ZC3HC1Q86WB0 502 aaKnown RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 CENPLQ8N0S6 344 aaPredicted RBP15.48■□□□□ 0.07
CNOT9-208ENST00000542068 AHI1Q8N157 1196 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 LINC01465Q8N7H1 131 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 FAM47BQ8NA70 645 aa15.48■□□□□ 0.07
CNOT9-208ENST00000542068 SHCBP1Q8NEM2 672 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms