RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 ERCC2P18074 760 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 CD72P21854 359 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 CD151P48509 253 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 ILF2Q12905 390 aaKnown RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 MPP3Q13368 585 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 NFATC2Q13469 925 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 HYIQ5T013 277 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 RNF43Q68DV7 783 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 STRA8Q7Z7C7 330 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 TPCN2Q8NHX9 752 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 C8orf48Q96LL4 319 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 FAM126AQ9BYI3 521 aaPredicted RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 TRIT1Q9H3H1 467 aaKnown RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 OR10H1Q9Y4A9 318 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 SNX8Q9Y5X2 465 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 BACE2Q9Y5Z0 518 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 DNAJC25-GNG10A0A024R161 153 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 HNF4AP41235 474 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 KCNJ1P48048 391 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 MASP1P48740 699 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 SNCBQ16143 134 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 MROH9Q5TGP6 573 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 PATL1Q86TB9 770 aaKnown RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 KBTBD6Q86V97 674 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 PDCD7Q8N8D1 485 aaKnown RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 MRPL43Q8N983 215 aaKnown RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 GLIS3Q8NEA6 775 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 SERPINI1Q99574 410 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 ELAC2Q9BQ52 826 aaKnown RBP8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 OSBPL6Q9BZF3 934 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 PSME2Q9UL46 239 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 CHKBQ9Y259 395 aa8.73□□□□□ -1.01
FNDC3A-206ENST00000541916 GLYATL1P3A0A0U1RQE8 302 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ADAMTS4O75173 837 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 GPR32O75388 356 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 VAPBO95292 243 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 NTSR1P30989 418 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 AP1S1P61966 158 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 CCZ1BP86790 482 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 CCZ1P86791 482 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SMAD4Q13485 552 aaKnown RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 CSHL1Q14406 222 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ZNF470Q6ECI4 717 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 AGMOQ6ZNB7 445 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SLC39A11Q8N1S5 342 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TRIM51Q9BSJ1 452 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PHF7Q9BWX1 381 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SPHK2Q9NRA0 654 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ATP6V1HQ9UI12 483 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TFR2Q9UP52 801 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ERVK-11Q9UQG0 969 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 A0A087X0T9 212 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 H0Y858 1186 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ITGB1P05556 798 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 FAM228BP0C875 321 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PIM1P11309 404 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SLC8A1P32418 973 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 MLLT3P42568 568 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TTPAP49638 278 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SOWAHAQ2M3V2 549 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 FNBP1LQ5T0N5 605 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ATAD3BQ5T9A4 648 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ZNF571Q7Z3V5 609 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 OVCA2Q8WZ82 227 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 VCX3AQ9NNX9 186 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PIH1D1Q9NWS0 290 aaKnown RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 HCN3Q9P1Z3 774 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 CER1O95813 267 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 KRT6AP02538 564 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 KRT6BP04259 564 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 RFC1P35251 1148 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 KRT6CP48668 564 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TBC1D25Q3MII6 688 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ARSHQ5FYA8 562 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 Q7L0L9 218 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ZSWIM2Q8NEG5 633 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TRPV1Q8NER1 839 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ACTL9Q8TC94 416 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ATG4AQ8WYN0 398 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PITPNM3Q9BZ71 974 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 IRX2Q9BZI1 471 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 TBC1D17Q9HA65 648 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 ZNF623O75123 536 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SERPINB8P50452 374 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PGS1Q32NB8 556 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 LRRC73Q5JTD7 316 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 C16orf46Q6P387 395 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SLC30A9Q6PML9 568 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 GDPD4Q6W3E5 623 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 C12orf56Q8IXR9 622 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 PRSS58Q8IYP2 241 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 KCTD13Q8WZ19 329 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 LRRC1Q9BTT6 524 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 FAM124BQ9H5Z6 455 aaPredicted RBP8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 HPSEQ9Y251 543 aa8.72□□□□□ -1.01
FNDC3A-206ENST00000541916 SH3BGRLO75368 114 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms