RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ZNF576Q9H609 170 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 CATSPERBQ9H7T0 1116 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 TMEM248Q9NWD8 314 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 GOLGA6AQ9NYA3 693 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 WHRNQ9P202 907 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 CTNNAL1Q9UBT7 734 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 CHMP2BQ9UQN3 213 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 MRPS23Q9Y3D9 190 aaKnown RBP7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 SH3BP1Q9Y3L3 701 aa7.87□□□□□ -1.15
AC005840.3-201ENST00000541888 NUP210Q8TEM1 1887 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 A0A0A0MRY4 1105 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 A0A0U1RQS6 177 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 KRBA1A5PL33 1030 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CARNS1A5YM72 827 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 E7EVH7 732 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 TGFBR3LH3BV60 316 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CBX4O00257 560 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 SOX1O00570 391 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 FGF10O15520 208 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 OPA1O60313 960 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 RAMP2O60895 175 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 TBX10O75333 385 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 C1RP00736 705 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CCNB1P14635 433 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 TPH1P17752 444 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CDC25CP30307 473 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 SSTR1P30872 391 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CCT5P48643 541 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 ITKQ08881 620 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 MESP2Q0VG99 397 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 XRCC4Q13426 336 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 PTPRRQ15256 657 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 RAB30Q15771 203 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 PREPLQ4J6C6 727 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 RNF219Q5W0B1 726 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 KCTD16Q68DU8 428 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 NAIF1Q69YI7 327 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 IL31Q6EBC2 164 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CXorf57Q6NSI4 855 aaKnown RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 KLHDC10Q6PID8 442 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CES3Q6UWW8 571 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 ZNF534Q76KX8 674 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 TMEM25Q86YD3 366 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 ARID3BQ8IVW6 561 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 PPIL6Q8IXY8 311 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 UNC5BQ8IZJ1 945 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 APCDD1Q8J025 514 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 PGBD5Q8N414 524 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 EPS8L3Q8TE67 593 aaKnown RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 ATP2A3Q93084 1043 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 RTP4Q96DX8 246 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 ASIC4Q96FT7 647 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 OXNAD1Q96HP4 312 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 SPATA13Q96N96 652 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 SMIM14Q96QK8 99 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 MLPHQ9BV36 600 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 CAPS2Q9BXY5 557 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 TXLNGYQ9BZA5 131 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 TTYH1Q9H313 450 aaPredicted RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 NT5MQ9NPB1 228 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 IPO11Q9UI26 975 aaKnown RBP7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 ASB3Q9Y575 518 aa7.86□□□□□ -1.15
AC005840.3-201ENST00000541888 COL4A3Q01955 1670 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 GOLGA6BA6NDN3 693 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ARHGAP42A6NI28 874 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 DRGXA6NNA5 263 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 NEDD8-MDP1E9PL57 170 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 H0Y626 953 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 K7ERQ8 282 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 XYLBO75191 536 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PPFIA2O75334 1257 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PMPCBO75439 489 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PEX11BO96011 259 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PRKCGP05129 697 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 HOXD9P28356 352 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 STIP1P31948 543 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 HSPA9P38646 679 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CHRNA4P43681 627 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 RGRP47804 291 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 LIG3P49916 1009 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 DRG2P55039 364 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SESN2P58004 480 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 DSC2Q02487 901 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TNK2Q07912 1038 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 KCNC3Q14003 757 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ADGRE1Q14246 886 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CCDC85BQ15834 202 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 LONRF1Q17RB8 773 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 ANO4Q32M45 955 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CCDC38Q502W7 563 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 AFMIDQ63HM1 303 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SYCE2Q6PIF2 218 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SYDE1Q6ZW31 735 aaPredicted RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 CAND1Q86VP6 1230 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SFTPA1Q8IWL2 248 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 GPR65Q8IYL9 337 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 SH2D3CQ8N5H7 860 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 PNPLA1Q8N8W4 532 aa7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 TDRD5Q8NAT2 981 aaKnown RBP7.85□□□□□ -1.15
AC005840.3-201ENST00000541888 OR6K2Q8NGY2 324 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms