RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 GUSBP11Q6P575 273 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 MAPK15Q8TD08 544 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 LMX1AQ8TE12 382 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 CENPIQ92674 756 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 RAB7BQ96AH8 199 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 TBC1D31Q96DN5 1066 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 HIC2Q96JB3 615 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 ZNF578Q96N58 590 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 PCDHB18PQ96TA0 734 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 TCEAL2Q9H3H9 227 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 USP29Q9HBJ7 922 aa16.49■□□□□ 0.23
TRIM65-203ENST00000540812 PNMA8BQ9ULN7 279 aaPredicted RBP16.49■□□□□ 0.23
TRIM65-203ENST00000540812 CXorf51AA0A1B0GTR3 108 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 H3BM21 787 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 CASC3O15234 703 aaKnown RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 AQP9O43315 295 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 RAMP2O60895 175 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 ITIH2P19823 946 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 TGM2P21980 687 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 SOX5P35711 763 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 IGFALSP35858 605 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 ETFBP38117 255 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 PTPN9P43378 593 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 JAM2P57087 298 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 PFN3P60673 137 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 POLR2FP61218 127 aaKnown RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 SNRPD1P62314 119 aaKnown RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 POLD3Q15054 466 aaPredicted RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 MYLK3Q32MK0 819 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 ZCCHC8Q6NZY4 707 aaKnown RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 STRADAQ7RTN6 431 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 EFL1Q7Z2Z2 1120 aaKnown RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 GPR155Q7Z3F1 870 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 ZSCAN30Q86W11 494 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 RBFAQ8N0V3 343 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 DENND6BQ8NEG7 585 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 OR2AP1Q8NGE2 309 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 FAM172AQ8WUF8 416 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 ASB12Q8WXK4 309 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 CENPTQ96BT3 561 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 KLHL32Q96NJ5 620 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 LGMNQ99538 433 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 ABCG4Q9H172 646 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 NUP62CLQ9H1M0 184 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 MAGEH1Q9H213 219 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 VPS16Q9H269 839 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 NOL6Q9H6R4 1146 aaKnown RBP16.48■□□□□ 0.23
TRIM65-203ENST00000540812 NLRC4Q9NPP4 1024 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 CSNK1G3Q9Y6M4 447 aa16.48■□□□□ 0.23
TRIM65-203ENST00000540812 A0A1W2PNU3 283 aaPredicted RBP16.47■□□□□ 0.23
TRIM65-203ENST00000540812 CPED1A4D0V7 1026 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 AREL1O15033 823 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 KDELR3O43731 214 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 GCATO75600 419 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 POP4O95707 220 aaKnown RBP16.47■□□□□ 0.23
TRIM65-203ENST00000540812 UNGP13051 313 aaPredicted RBP16.47■□□□□ 0.23
TRIM65-203ENST00000540812 LSSP48449 732 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 GEMIN4P57678 1058 aaKnown RBP16.47■□□□□ 0.23
TRIM65-203ENST00000540812 PCBP4P57723 403 aaKnown RBP16.47■□□□□ 0.23
TRIM65-203ENST00000540812 CXADRP78310 365 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 C1orf61Q13536 156 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 KRT31Q15323 416 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 VPS36Q86VN1 386 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 PYROXD2Q8N2H3 581 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 ZNF248Q8NDW4 579 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 KLC2Q9H0B6 622 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 RETREG1Q9H6L5 497 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 POLR1BQ9H9Y6 1135 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 FAM207AQ9NSI2 230 aaPredicted RBP16.47■□□□□ 0.23
TRIM65-203ENST00000540812 EVA1BQ9NVM1 165 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 HPCAL4Q9UM19 191 aa16.47■□□□□ 0.23
TRIM65-203ENST00000540812 COL27A1Q8IZC6 1860 aaPredicted RBP16.46■□□□□ 0.23
TRIM65-203ENST00000540812 RP1P56715 2156 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 TK2O00142 265 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 BUB1O43683 1085 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 LZTS3O60299 673 aaPredicted RBP16.46■□□□□ 0.23
TRIM65-203ENST00000540812 DXOO77932 396 aaKnown RBP16.46■□□□□ 0.23
TRIM65-203ENST00000540812 TMCC1O94876 653 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 MBD3O95983 291 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 RFC1P35251 1148 aaPredicted RBP16.46■□□□□ 0.23
TRIM65-203ENST00000540812 C19orf57Q0VDD7 668 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 ISXQ2M1V0 245 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 CRTC1Q6UUV9 634 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 PCSK4Q6UW60 755 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 GDPD4Q6W3E5 623 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 NTAN1Q96AB6 310 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 OSBPL1AQ9BXW6 950 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 ASCL3Q9NQ33 180 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 MBNL1Q9NR56 388 aaKnown RBP16.46■□□□□ 0.23
TRIM65-203ENST00000540812 SALL4Q9UJQ4 1053 aa16.46■□□□□ 0.23
TRIM65-203ENST00000540812 ZNF462Q96JM2 2506 aa16.46■□□□□ 0.22
TRIM65-203ENST00000540812 TEX51A0A1B0GUA7 166 aa16.45■□□□□ 0.22
TRIM65-203ENST00000540812 EME2A4GXA9 379 aaPredicted RBP16.45■□□□□ 0.22
TRIM65-203ENST00000540812 TPP1O14773 563 aa16.45■□□□□ 0.22
TRIM65-203ENST00000540812 INSIG1O15503 277 aa16.45■□□□□ 0.22
TRIM65-203ENST00000540812 MMP20O60882 483 aa16.45■□□□□ 0.22
TRIM65-203ENST00000540812 ZIC2O95409 532 aaPredicted RBP16.45■□□□□ 0.22
TRIM65-203ENST00000540812 KRT3P12035 628 aa16.45■□□□□ 0.22
TRIM65-203ENST00000540812 TIMP2P16035 220 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms