RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 RARS2Q5T160 578 aaKnown RBP24.83■■□□□ 1.57
TTC3-225ENST00000540756 ASTLQ6HA08 431 aaPredicted RBP24.83■■□□□ 1.57
TTC3-225ENST00000540756 CYS1Q717R9 158 aa24.83■■□□□ 1.57
TTC3-225ENST00000540756 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.83■■□□□ 1.57
TTC3-225ENST00000540756 MGARPQ8TDB4 240 aa24.83■■□□□ 1.57
TTC3-225ENST00000540756 LMAN2LQ9H0V9 348 aa24.83■■□□□ 1.57
TTC3-225ENST00000540756 PSD3Q9NYI0 1048 aa24.83■■□□□ 1.57
TTC3-225ENST00000540756 FAM169AQ9Y6X4 670 aa24.83■■□□□ 1.57
TTC3-225ENST00000540756 HMX2A2RU54 273 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 NEDD8-MDP1E9PL57 170 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 GLP2RO95838 553 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 PRKCGP05129 697 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 POU2F2P09086 479 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 PCID2Q5JVF3 399 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 RNF43Q68DV7 783 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 FIBINQ8TAL6 211 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 SERAC1Q96JX3 654 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 AGAP2Q99490 1192 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 ARNT2Q9HBZ2 717 aa24.83■■□□□ 1.56
TTC3-225ENST00000540756 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.83■■□□□ 1.56
TTC3-225ENST00000540756 LOC285095A0A1B0GVY8 99 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 KRT4P19013 534 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 HLA-FP30511 346 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 VIPR2P41587 438 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 USP4Q13107 963 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 GALNT3Q14435 633 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 RFTN1Q14699 578 aaPredicted RBP24.82■■□□□ 1.56
TTC3-225ENST00000540756 LRRC14Q15048 493 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 PKN3Q6P5Z2 889 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 RASSF3Q86WH2 238 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 BBS5Q8N3I7 341 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 ANKRD42Q8N9B4 389 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 LMLNQ96KR4 655 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 ABCB8Q9NUT2 735 aa24.82■■□□□ 1.56
TTC3-225ENST00000540756 MAGEB16A2A368 324 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 AP3B1O00203 1094 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 SMAD6O43541 496 aaKnown RBP24.81■■□□□ 1.56
TTC3-225ENST00000540756 SEPT6Q14141 434 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 ESRP1Q6NXG1 681 aaKnown RBP24.81■■□□□ 1.56
TTC3-225ENST00000540756 DCAF4L2Q8NA75 395 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 CNOT10Q9H9A5 744 aaKnown RBP24.81■■□□□ 1.56
TTC3-225ENST00000540756 SFXN1Q9H9B4 322 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 LHX3Q9UBR4 397 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 INSIG1O15503 277 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 CYBBP04839 570 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 SERPINF2P08697 491 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 CTSOP43234 321 aaPredicted RBP24.81■■□□□ 1.56
TTC3-225ENST00000540756 CDK18Q07002 472 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 MGAT5Q09328 741 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 NR1H3Q13133 447 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 HSP90AA5PQ58FG0 334 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 ADGRG2Q8IZP9 1017 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 IRF7Q92985 503 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 BBS2Q9BXC9 721 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 TCAF1Q9Y4C2 921 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 ACTL7BQ9Y614 415 aa24.81■■□□□ 1.56
TTC3-225ENST00000540756 SOBPA7XYQ1 873 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 TRIM49D1C9J1S8 452 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 TRIM24O15164 1050 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 SERPINH1P50454 418 aaKnown RBP24.8■■□□□ 1.56
TTC3-225ENST00000540756 PLEKHG6Q3KR16 790 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 LY6G5CQ5SRR4 150 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 ATXN7L2Q5T6C5 722 aaPredicted RBP24.8■■□□□ 1.56
TTC3-225ENST00000540756 ELMSAN1Q6PJG2 1045 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 MRPL38Q96DV4 380 aaKnown RBP24.8■■□□□ 1.56
TTC3-225ENST00000540756 SMIM14Q96QK8 99 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 SCUBE2Q9NQ36 999 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 C20orf96Q9NUD7 363 aaPredicted RBP24.8■■□□□ 1.56
TTC3-225ENST00000540756 KIAA1522Q9P206 1035 aaPredicted RBP24.8■■□□□ 1.56
TTC3-225ENST00000540756 ZNF180Q9UJW8 692 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 CHKBQ9Y259 395 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 PCDHGC4Q9Y5F7 938 aa24.8■■□□□ 1.56
TTC3-225ENST00000540756 IQANK1A0A1B0GTG1 560 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 PIRTP0C851 137 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 BMP1P13497 986 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 LSP1P33241 339 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 MROH9Q5TGP6 573 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 MARK2Q7KZI7 788 aaKnown RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 PPHLN1Q8NEY8 458 aaKnown RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 ATXN2LQ8WWM7 1075 aaKnown RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 TIFAQ96CG3 184 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 IFT43Q96FT9 208 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 RPL10LQ96L21 214 aaKnown RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 TRIB3Q96RU7 358 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 SPHK2Q9NRA0 654 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 ZFATQ9P243 1243 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 NUP210Q8TEM1 1887 aaPredicted RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 PENKP01210 267 aaPredicted RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 ARNTP27540 789 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 CNGA3Q16281 694 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 TRIM68Q6AZZ1 485 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 NPAS3Q8IXF0 933 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 SMC6Q96SB8 1091 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 C2orf49Q9BVC5 232 aaPredicted RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 TM6SF2Q9BZW4 377 aa24.79■■□□□ 1.56
TTC3-225ENST00000540756 C12orf65Q9H3J6 166 aaKnown RBP24.79■■□□□ 1.56
TTC3-225ENST00000540756 PDHA1P08559 390 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 TYRP14679 529 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 HYAL1Q12794 435 aa24.78■■□□□ 1.56
TTC3-225ENST00000540756 INO80DQ53TQ3 878 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms