RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 MPP1Q00013 466 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 ZNF460Q14592 562 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 KIAA0319Q5VV43 1072 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 IL23RQ5VWK5 629 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 CHSY3Q70JA7 882 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 PIWIL4Q7Z3Z4 852 aaKnown RBP12.43□□□□□ -0.42
NPC1-202ENST00000540608 MFSD6LQ8IWD5 586 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 DENND6AQ8IWF6 608 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 FAM156AQ8NDB6 213 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 TMEM40Q8WWA1 233 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 TOP1MTQ969P6 601 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 OMDQ99983 421 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 MRPL57Q9BQC6 102 aaKnown RBP12.43□□□□□ -0.42
NPC1-202ENST00000540608 WDCPQ9H6R7 721 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 CNGB3Q9NQW8 809 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 OR12D3Q9UGF7 316 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 CENPFP49454 3210 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 FAM95CA0A1B0GW59 222 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 CCDC160A6NGH7 325 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 KCNU1A8MYU2 1149 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 TMEM233B4DJY2 109 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 TMCC1O94876 653 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 C8BP07358 591 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 TCN1P20061 433 aaPredicted RBP12.43□□□□□ -0.42
NPC1-202ENST00000540608 ARCN1P48444 511 aaKnown RBP12.43□□□□□ -0.42
NPC1-202ENST00000540608 ZNF33AQ06730 810 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 STX5Q13190 355 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 CTBP1Q13363 440 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 WSCD1Q658N2 575 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 DPP9Q86TI2 863 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 SUDS3Q9H7L9 328 aaPredicted RBP12.43□□□□□ -0.42
NPC1-202ENST00000540608 RRN3Q9NYV6 651 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 AP4S1Q9Y587 144 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 SNX10Q9Y5X0 201 aa12.43□□□□□ -0.42
NPC1-202ENST00000540608 A0A087X1B8 175 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 LRIG2O94898 1065 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 RABGGTBP53611 331 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 COG7P83436 770 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 LDLRAD1Q5T700 205 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 GK5Q6ZS86 529 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 TRIM67Q6ZTA4 783 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 ZNF467Q7Z7K2 595 aaPredicted RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 SPATA6LQ8N4H0 392 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 TXNDC5Q8NBS9 432 aaKnown RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 SPPL2BQ8TCT7 592 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 EME1Q96AY2 570 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 MAML3Q96JK9 1138 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 FAR2Q96K12 515 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 ZNF597Q96LX8 424 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 TBL1YQ9BQ87 522 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 UNC93B1Q9H1C4 597 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 SARDHQ9UL12 918 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 PIN4Q9Y237 131 aaKnown RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 USP17L7P0C7H9 530 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 SMIM10L2AP0DMW4 78 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 SMIM10L2BP0DMW5 78 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 PSMC3P17980 439 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 ATP5F1P24539 256 aaPredicted RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 CXCR3P49682 368 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 RHDQ02161 417 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 TRAP1Q12931 704 aaKnown RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 LRP8Q14114 963 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 MAPRE2Q15555 327 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 RAB41Q5JT25 222 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 PM20D1Q6GTS8 502 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 ESRP1Q6NXG1 681 aaKnown RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 CNSTQ6PJW8 725 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 PCDH20Q8N6Y1 951 aaKnown RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 SPATA22Q8NHS9 363 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 SLC10A4Q96EP9 437 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 CELF6Q96J87 481 aaKnown RBP12.42□□□□□ -0.42
NPC1-202ENST00000540608 SMOQ99835 787 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 FTHL17Q9BXU8 183 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 TKTL2Q9H0I9 626 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 THEGQ9P2T0 379 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 HSFX1Q9UBD0 423 aa12.42□□□□□ -0.42
NPC1-202ENST00000540608 MYOCOSA0A1B0GUC4 107 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 C7orf72A4D263 438 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 E7ENX8 843 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 ARNTP27540 789 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 LRPAP1P30533 357 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 KPNA2P52292 529 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 TAS2R39P59534 338 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 POU6F1Q14863 301 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 UBXN11Q5T124 520 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 DCLRE1AQ6PJP8 1040 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 GPRIN1Q7Z2K8 1008 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 CCDC117Q8IWD4 279 aaPredicted RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 CHERPQ8IWX8 916 aaKnown RBP12.41□□□□□ -0.42
NPC1-202ENST00000540608 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 HEXDCQ8WVB3 486 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 FCRL5Q96RD9 977 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 POMKQ9H5K3 350 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 COQ10BQ9H8M1 238 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 CRTAC1Q9NQ79 661 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 GTSE1Q9NYZ3 720 aa12.41□□□□□ -0.42
NPC1-202ENST00000540608 NUP205Q92621 2012 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms