RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 NSMCE3Q96MG7 304 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 SP110Q9HB58 689 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 FZD3Q9NPG1 666 aa15.27■□□□□ 0.04
UBE3B-212ENST00000540230 CABIN1Q9Y6J0 2220 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 VILLO15195 856 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 SLC31A1O15431 190 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 MFSD11O43934 449 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PALMO75781 387 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 MTA2O94776 668 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PCDH8O95206 1070 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PEX11BO96011 259 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 ITIH2P19823 946 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 CD38P28907 300 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 MAN1A1P33908 653 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 IL10RBQ08334 325 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 FGL2Q14314 439 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 TEAD4Q15561 434 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 ZNF284Q2VY69 593 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PRAMEF14Q5SWL7 426 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 NAPEPLDQ6IQ20 393 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 FBXL19Q6PCT2 694 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 GDPD4Q6W3E5 623 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.03
UBE3B-212ENST00000540230 HORMAD1Q86X24 394 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 LZTR1Q8N653 840 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PCDH19Q8TAB3 1148 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 LRIG1Q96JA1 1093 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 CAMK1GQ96NX5 476 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 CALN1Q9BXU9 219 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 HYOU1Q9Y4L1 999 aa15.27■□□□□ 0.03
UBE3B-212ENST00000540230 PCNX2A6NKB5 2137 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 SOWAHDA6NJG2 315 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 H0Y8X5 98 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 SH3BP5O60239 455 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 BUB1BO60566 1050 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-212ENST00000540230 MAFKO60675 156 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 MAP3K6O95382 1288 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 LCA5LO95447 670 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 CER1O95813 267 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 FAM193AP78312 1265 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 SLC10A7Q0GE19 358 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 TMEM259Q4ZIN3 620 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 NCBP2-AS2Q69YL0 99 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 RHOT2Q8IXI1 618 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 RAPGEF5Q92565 580 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 OSBPL1AQ9BXW6 950 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 TM7SF3Q9NS93 570 aa15.26■□□□□ 0.03
UBE3B-212ENST00000540230 RCOR3Q9P2K3 495 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-212ENST00000540230 TTC24A2A3L6 582 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 AP1G1O43747 822 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 CSRP1P21291 193 aaKnown RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 FECHP22830 423 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 MAGEA1P43355 309 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 IL9RQ01113 521 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 CCDC15Q0P6D6 951 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 SETMARQ53H47 684 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 ANKRD20A8PQ5CZ79 823 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 N4BP2L1Q5TBK1 243 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 NEK5Q6P3R8 708 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 IL27RAQ6UWB1 636 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 ZSWIM9Q86XI8 627 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 SPATS2Q86XZ4 545 aaKnown RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 PQLC3Q8N755 202 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 TMEM145Q8NBT3 493 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 KCTD6Q8NC69 237 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 FAF2Q96CS3 445 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 ZNF670Q9BS34 389 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 CINPQ9BW66 212 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 CPEB1Q9BZB8 566 aaKnown RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 GOLPH3Q9H4A6 298 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 CAAP1Q9H8G2 361 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 INTUQ9ULD6 942 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 TPX2Q9ULW0 747 aaKnown RBP15.25■□□□□ 0.03
UBE3B-212ENST00000540230 DMTF1Q9Y222 760 aa15.25■□□□□ 0.03
UBE3B-212ENST00000540230 LRRK1Q38SD2 2015 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 UPK3BL1B0FP48 263 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 UPK3BL2E5RIL1 263 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 AREL1O15033 823 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 RAD51BO15315 384 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 ADRB1P08588 477 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 KRT7P08729 469 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 TIMP2P16035 220 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 C21orf59P57076 290 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 RAD51Q06609 339 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 LBRQ14739 615 aaKnown RBP15.24■□□□□ 0.03
UBE3B-212ENST00000540230 TCEAL1Q15170 157 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 ZNF423Q2M1K9 1284 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 TMCO4Q5TGY1 634 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 KDM7AQ6ZMT4 941 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 CAMK1DQ8IU85 385 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 PGBD5Q8N414 524 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 LRRN4Q8WUT4 740 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 PANX2Q96RD6 677 aa15.24■□□□□ 0.03
UBE3B-212ENST00000540230 RCCD1A6NED2 376 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PRAMEF26H0Y7S4 382 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 TLR4O00206 839 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PAK4O96013 591 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-212ENST00000540230 PRKCGP05129 697 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 CEACAM1P13688 526 aa15.23■□□□□ 0.03
UBE3B-212ENST00000540230 KDELR1P24390 212 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms