RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 DOLKQ9UPQ8 538 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 PCDHB11Q9Y5F2 797 aa11.82□□□□□ -0.52
CLSTN3-209ENST00000539982 ILVBLA1L0T0 632 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 C16orf96A6NNT2 1141 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 HSP90AA1P07900 732 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ALPIP09923 528 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 GNA15P30679 374 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ABL2P42684 1182 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 CXCR3P49682 368 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 BLKP51451 505 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 CYP4F2P78329 520 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 KRT85P78386 507 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 PNOCQ13519 176 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 MORC3Q14149 939 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 CLCA4Q14CN2 919 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ELOCQ15369 112 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 CCDC40Q4G0X9 1142 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ZNF805Q5CZA5 627 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ACBD5Q5T8D3 534 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ZNF783Q6ZMS7 281 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 MACC1Q6ZN28 852 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 C11orf57Q6ZUT1 292 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 TFAP2DQ7Z6R9 452 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 VASH2Q86V25 355 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ZFAND4Q86XD8 727 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 DTX1Q86Y01 620 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 SDR16C5Q8N3Y7 309 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 OR7D4Q8NG98 312 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 OR6C4Q8NGE1 309 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ARHGEF26Q96DR7 871 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 CPEB1Q9BZB8 566 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 LRRN3Q9H3W5 708 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 UBE2TQ9NPD8 197 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 PIGVQ9NUD9 493 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 MPP6Q9NZW5 540 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 HECAQ9UBI9 543 aaPredicted RBP11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 GGT7Q9UJ14 662 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 LOXL2Q9Y4K0 774 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 LRRK2Q5S007 2527 aa11.81□□□□□ -0.52
CLSTN3-209ENST00000539982 IGLV3-10A0A075B6K4 115 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 PRAMEF33A0A0G2JMD5 474 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 A0A1W2PQC6 194 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 I6L893 689 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 PRAMEF10O60809 474 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 DAB1O75553 588 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 CELA2BP08218 269 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 WT1P19544 449 aaPredicted RBP11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 IGFALSP35858 605 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 HK3P52790 923 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 SNX16P57768 344 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ARF5P84085 180 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 SLC6A3Q01959 620 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ZFP36L1Q07352 338 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 OLFML1Q6UWY5 402 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 FAM183BPQ6ZVS7 135 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 VPS36Q86VN1 386 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 KYQ8NBH2 561 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 PCDH19Q8TAB3 1148 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 HTR3CQ8WXA8 447 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ISG20Q96AZ6 181 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 NPY6RQ99463 290 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 FUCA2Q9BTY2 467 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 C1QTNF7Q9BXJ2 289 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 EDEM3Q9BZQ6 932 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ADNPQ9H2P0 1102 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ZDHHC6Q9H6R6 413 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ATP13A1Q9HD20 1204 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 RRN3Q9NYV6 651 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 SIRPGQ9P1W8 387 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 GPR34Q9UPC5 381 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 ITM2BQ9Y287 266 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 FCF1Q9Y324 198 aaKnown RBP11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 SNX10Q9Y5X0 201 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 BSNQ9UPA5 3926 aa11.8□□□□□ -0.52
CLSTN3-209ENST00000539982 CXorf51AA0A1B0GTR3 108 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 TMEM110-MUSTN1A8MSY1 372 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 PSMA7O14818 248 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 AREL1O15033 823 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 TM7SF2O76062 418 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 CD160O95971 181 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 F9P00740 461 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 CTSEP14091 401 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 ITIH1P19827 911 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 CR2P20023 1033 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 CD82P27701 267 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 GKP32189 559 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 PEX5P50542 639 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 GNA12Q03113 381 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 SERINC3Q13530 473 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 BECN1Q14457 450 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 ARTNQ5T4W7 220 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 OTUD1Q5VV17 481 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 ENOSF1Q7L5Y1 443 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 TTC7BQ86TV6 843 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 GKN2Q86XP6 184 aa11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 RYBPQ8N488 228 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-209ENST00000539982 ZNF397Q8NF99 534 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms