RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 ETNK2Q9NVF9 386 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ASNSD1Q9NWL6 643 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 MOCS1Q9NZB8 636 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 TCEAL9Q9UHQ7 104 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 PTBP2Q9UKA9 531 aaKnown RBP7.78□□□□□ -1.16
CCDC60-204ENST00000539847 CDY1Q9Y6F8 540 aa7.78□□□□□ -1.16
CCDC60-204ENST00000539847 A0A0J9YVX5 310 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GOLGA8QA0A0J9YX86 632 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TCRBV7S3A2A0A539 114 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 RGSL1A5PLK6 1076 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GOLGA8OA6NCC3 632 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TRIM64CA6NLI5 447 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TBKBP1A7MCY6 615 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM114B3SHH9 223 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GOLGA8NF8WBI6 632 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SLCO1B7G3V0H7 640 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GOLGA8SH3BPF8 625 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GOLGA8MH3BSY2 632 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF195O14628 629 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CBFA2T3O75081 653 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GCATO75600 419 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FBXO21O94952 628 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 STBD1O95210 358 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TRUB2O95900 331 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 GSRP00390 522 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ASS1P00966 412 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 KRT3P12035 628 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF23P17027 643 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TNNI1P19237 187 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ITGAXP20702 1163 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TGM2P21980 687 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PSMA2P25787 234 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TPP2P29144 1249 aaPredicted RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TTKP33981 857 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PSMD8P48556 350 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SLC1A6P48664 564 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CRYBB1P53674 252 aaPredicted RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ALDH18A1P54886 795 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 AQP4P55087 323 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 NLRP11P59045 1033 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TXNL4AP83876 142 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 OGDHQ02218 1023 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PPIDQ08752 370 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TRPC3Q13507 836 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TRIP10Q15642 601 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CCDC153Q494R4 210 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PAN2Q504Q3 1202 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FASTKD1Q53R41 847 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 BOLA3Q53S33 107 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF484Q5JVG2 852 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 HP1BP3Q5SSJ5 553 aaPredicted RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FAM160B1Q5W0V3 765 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 MBLAC2Q68D91 279 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CES5AQ6NT32 575 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 RWDD4Q6NW29 188 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SYCE2Q6PIF2 218 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 Q6ZNX1 250 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CDHR3Q6ZTQ4 885 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ANKS3Q6ZW76 656 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 RBM23Q86U06 439 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 KIAA0319LQ8IZA0 1049 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 NDUFAF2Q8N183 169 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PPM1NQ8N819 430 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 TERB1Q8NA31 727 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ZBTB8BQ8NAP8 495 aaPredicted RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ZFP28Q8NHY6 868 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 RP9Q8TA86 221 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ISL2Q96A47 359 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FAF2Q96CS3 445 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 VPS50Q96JG6 964 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CLPTM1LQ96KA5 538 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 KLF6Q99612 283 aaPredicted RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 EBNA1BP2Q99848 306 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ADAM2Q99965 735 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FAM118BQ9BPY3 351 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FAM213AQ9BRX8 229 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PI4K2AQ9BTU6 479 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 KLC2Q9H0B6 622 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SDCBP2Q9H190 292 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CWH43Q9H720 699 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 POPDC2Q9HBU9 364 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 APOBEC3GQ9HC16 384 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 FAIMQ9NVQ4 179 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CLIC5Q9NZA1 410 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 MID2Q9UJV3 735 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 ADAM28Q9UKQ2 775 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 AGO2Q9UKV8 859 aaKnown RBP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 BLOC1S6Q9UL45 172 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 CHMP2BQ9UQN3 213 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SH3GLB1Q9Y371 365 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 PCDHA10Q9Y5I2 948 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 IRAK3Q9Y616 596 aa7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SF3B1O75533 1304 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC60-204ENST00000539847 SH3PXD2BA1X283 911 aa7.76□□□□□ -1.17
CCDC60-204ENST00000539847 EREGO14944 169 aa7.76□□□□□ -1.17
CCDC60-204ENST00000539847 HNRNPDLO14979 420 aaKnown RBP7.76□□□□□ -1.17
CCDC60-204ENST00000539847 PLIN3O60664 434 aa7.76□□□□□ -1.17
CCDC60-204ENST00000539847 LRCH4O75427 683 aa7.76□□□□□ -1.17
CCDC60-204ENST00000539847 BMP10O95393 424 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms