RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 MARCH9Q86YJ5 346 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 SLC25A45Q8N413 288 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 RYBPQ8N488 228 aaPredicted RBP17.02■□□□□ 0.32
DDB1-215ENST00000539712 OXR1Q8N573 874 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 EID2Q8N6I1 236 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 CASKIN2Q8WXE0 1202 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 TSC1Q92574 1164 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 SYN2Q92777 582 aaPredicted RBP17.02■□□□□ 0.32
DDB1-215ENST00000539712 KLHL32Q96NJ5 620 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 KLF6Q99612 283 aaPredicted RBP17.02■□□□□ 0.32
DDB1-215ENST00000539712 C1QTNF2Q9BXJ5 285 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 SLC39A8Q9C0K1 460 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 DHX35Q9H5Z1 703 aaKnown RBP17.02■□□□□ 0.32
DDB1-215ENST00000539712 LHX3Q9UBR4 397 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 ITM2BQ9Y287 266 aa17.02■□□□□ 0.32
DDB1-215ENST00000539712 TMEM8BA6NDV4 472 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 POM121BA6NF01 834 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 EIF3CLB5ME19 914 aaKnown RBP17.01■□□□□ 0.31
DDB1-215ENST00000539712 J3KR12 359 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 TAF4O00268 1085 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 MAGEC1O60732 1142 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 PAK4O96013 591 aaPredicted RBP17.01■□□□□ 0.31
DDB1-215ENST00000539712 TCF4P15884 667 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 ITIH2P19823 946 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 IL1R2P27930 398 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 AKT2P31751 481 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 NDST2P52849 883 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 UBASH3AP57075 661 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 TPI1P60174 286 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 INAVAQ3KP66 663 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 KIAA1161Q6NSJ0 714 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 GDPD4Q6W3E5 623 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 ARHGAP12Q8IWW6 846 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 ZNF653Q96CK0 615 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 CELF6Q96J87 481 aaKnown RBP17.01■□□□□ 0.31
DDB1-215ENST00000539712 FEM1CQ96JP0 617 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 EIF3CQ99613 913 aaKnown RBP17.01■□□□□ 0.31
DDB1-215ENST00000539712 OSBPL1AQ9BXW6 950 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 KLHL11Q9NVR0 708 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 FTSJ1Q9UET6 329 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 CAPN11Q9UMQ6 739 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 HS3ST3A1Q9Y663 406 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 APC2O95996 2303 aa17.01■□□□□ 0.31
DDB1-215ENST00000539712 IGLON5A6NGN9 336 aa17■□□□□ 0.31
DDB1-215ENST00000539712 EEF2KO00418 725 aaKnown RBP17■□□□□ 0.31
DDB1-215ENST00000539712 TSPAN6O43657 245 aa17■□□□□ 0.31
DDB1-215ENST00000539712 PRAMEF11O60813 436 aa17■□□□□ 0.31
DDB1-215ENST00000539712 SDC3O75056 442 aa17■□□□□ 0.31
DDB1-215ENST00000539712 GIMD1P0DJR0 217 aa17■□□□□ 0.31
DDB1-215ENST00000539712 TIMP2P16035 220 aa17■□□□□ 0.31
DDB1-215ENST00000539712 DNAJC3Q13217 504 aa17■□□□□ 0.31
DDB1-215ENST00000539712 SMAD1Q15797 465 aaKnown RBP17■□□□□ 0.31
DDB1-215ENST00000539712 ZSCAN23Q3MJ62 389 aa17■□□□□ 0.31
DDB1-215ENST00000539712 KDM7AQ6ZMT4 941 aa17■□□□□ 0.31
DDB1-215ENST00000539712 Q6ZSR6 202 aa17■□□□□ 0.31
DDB1-215ENST00000539712 RFX8Q6ZV50 586 aa17■□□□□ 0.31
DDB1-215ENST00000539712 NPWQ8N729 165 aa17■□□□□ 0.31
DDB1-215ENST00000539712 RAB7BQ96AH8 199 aa17■□□□□ 0.31
DDB1-215ENST00000539712 CNDP2Q96KP4 475 aaKnown RBP17■□□□□ 0.31
DDB1-215ENST00000539712 GDAP1L1Q96MZ0 367 aa17■□□□□ 0.31
DDB1-215ENST00000539712 LENG8Q96PV6 779 aaPredicted RBP17■□□□□ 0.31
DDB1-215ENST00000539712 UCKL1Q9NWZ5 548 aa17■□□□□ 0.31
DDB1-215ENST00000539712 CWC15Q9P013 229 aaKnown RBP17■□□□□ 0.31
DDB1-215ENST00000539712 A0A087X0T9 212 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 TRIM38O00635 465 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 ENC1O14682 589 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 LDOC1O95751 146 aaPredicted RBP16.99■□□□□ 0.31
DDB1-215ENST00000539712 GYPCP04921 128 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 FAM228BP0C875 321 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 MYBL1P10243 752 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 ERCC2P18074 760 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 HCAR3P49019 387 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 PAPOLAP51003 745 aaKnown RBP16.99■□□□□ 0.31
DDB1-215ENST00000539712 RHOAP61586 193 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 ZBED6P86452 979 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 CAMK2BQ13554 666 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 DPYSQ14117 519 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 LRRC73Q5JTD7 316 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 TPRG1LQ5T0D9 272 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 DHRS13Q6UX07 377 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 ZNF354CQ86Y25 554 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 PSTKQ8IV42 348 aaKnown RBP16.99■□□□□ 0.31
DDB1-215ENST00000539712 TP53INP2Q8IXH6 220 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 ASB12Q8WXK4 309 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 ZCCHC14Q8WYQ9 949 aaKnown RBP16.99■□□□□ 0.31
DDB1-215ENST00000539712 EXOC2Q96KP1 924 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 CPEB1Q9BZB8 566 aaKnown RBP16.99■□□□□ 0.31
DDB1-215ENST00000539712 MYO1AQ9UBC5 1043 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 DKK3Q9UBP4 350 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 NENFQ9UMX5 172 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 PCDHGA1Q9Y5H4 931 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 BZW2Q9Y6E2 419 aaKnown RBP16.99■□□□□ 0.31
DDB1-215ENST00000539712 SCINQ9Y6U3 715 aa16.99■□□□□ 0.31
DDB1-215ENST00000539712 SRRM3A6NNA2 597 aaPredicted RBP16.98■□□□□ 0.31
DDB1-215ENST00000539712 PRPSAP2O60256 369 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 BUB1BO60566 1050 aaPredicted RBP16.98■□□□□ 0.31
DDB1-215ENST00000539712 RNF8O76064 485 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 IGSF6O95976 241 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 DGKAP23743 735 aa16.98■□□□□ 0.31
DDB1-215ENST00000539712 PCK1P35558 622 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms