RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 RYBPQ8N488 228 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 FAM181AQ8N9Y4 354 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 FAM172AQ8WUF8 416 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 ASB12Q8WXK4 309 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 BAP1Q92560 729 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 NTAN1Q96AB6 310 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 LENG8Q96PV6 779 aaPredicted RBP12.71□□□□□ -0.37
VAMP1-206ENST00000538970 PCDHB18PQ96TA0 734 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 PRORYQ9H606 182 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 USP29Q9HBJ7 922 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 SIK3Q9Y2K2 1263 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 PCDHB1Q9Y5F3 818 aa12.71□□□□□ -0.37
VAMP1-206ENST00000538970 IGLON5A6NGN9 336 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 H3BM21 787 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 KRIT1O00522 736 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 UGT2B4P06133 528 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 KRT3P12035 628 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 GPD1P21695 349 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 RFC1P35251 1148 aaPredicted RBP12.7□□□□□ -0.38
VAMP1-206ENST00000538970 ACTN2P35609 894 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 STAT1P42224 750 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 PFN3P60673 137 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 SNRPD1P62314 119 aaKnown RBP12.7□□□□□ -0.38
VAMP1-206ENST00000538970 SGCGQ13326 291 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 PDE1CQ14123 709 aaPredicted RBP12.7□□□□□ -0.38
VAMP1-206ENST00000538970 TBC1D25Q3MII6 688 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
VAMP1-206ENST00000538970 DENND6BQ8NEG7 585 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 FGF11Q92914 225 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 OSBPL1AQ9BXW6 950 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 NOL6Q9H6R4 1146 aaKnown RBP12.7□□□□□ -0.38
VAMP1-206ENST00000538970 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 KLF15Q9UIH9 416 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 HPCAL4Q9UM19 191 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 HECTD1Q9ULT8 2610 aa12.7□□□□□ -0.38
VAMP1-206ENST00000538970 CHD5Q8TDI0 1954 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 MYO18BQ8IUG5 2567 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 ZSCAN5CA6NGD5 496 aaPredicted RBP12.69□□□□□ -0.38
VAMP1-206ENST00000538970 NEMP1O14524 444 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 AREL1O15033 823 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 KDELR3O43731 214 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 TMCC1O94876 653 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 POP4O95707 220 aaKnown RBP12.69□□□□□ -0.38
VAMP1-206ENST00000538970 CALB1P05937 261 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 TPM2P07951 284 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 DUSP3P51452 185 aaPredicted RBP12.69□□□□□ -0.38
VAMP1-206ENST00000538970 CLEC16AQ2KHT3 1053 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 MYLK3Q32MK0 819 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 ATXN7L2Q5T6C5 722 aaPredicted RBP12.69□□□□□ -0.38
VAMP1-206ENST00000538970 ZCCHC8Q6NZY4 707 aaKnown RBP12.69□□□□□ -0.38
VAMP1-206ENST00000538970 MON1BQ7L1V2 547 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 PYROXD2Q8N2H3 581 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 RTL3Q8N8U3 475 aaKnown RBP12.69□□□□□ -0.38
VAMP1-206ENST00000538970 C3orf20Q8ND61 904 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 IFI44Q8TCB0 444 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 ARHGEF26Q96DR7 871 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 GDAP1L1Q96MZ0 367 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 KLHL32Q96NJ5 620 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 DEPDC7Q96QD5 511 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 SELENOOQ9BVL4 669 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 EVA1BQ9NVM1 165 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 FANCLQ9NW38 375 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 CSNK1G3Q9Y6M4 447 aa12.69□□□□□ -0.38
VAMP1-206ENST00000538970 MYLKQ15746 1914 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 TCRBV5S1A1TA0A578 114 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 CCP110O43303 1012 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 AQP9O43315 295 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 BUB1O43683 1085 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 LZTS3O60299 673 aaPredicted RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 CSO75390 466 aaKnown RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 JUNDP17535 347 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 EPHB2P29323 1055 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 IGFALSP35858 605 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 COPB1P53618 953 aaKnown RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 EIF2B5Q13144 721 aaKnown RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 SYCP1Q15431 976 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 EFHC2Q5JST6 749 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 LRRC73Q5JTD7 316 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 WDR59Q6PJI9 974 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 GDPD4Q6W3E5 623 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 CLEC17AQ6ZS10 378 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 RBM43Q6ZSC3 357 aaKnown RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 SLFN11Q7Z7L1 901 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 MAPK15Q8TD08 544 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 CASKIN2Q8WXE0 1202 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 CENPTQ96BT3 561 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 FCRL3Q96P31 734 aaPredicted RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 TTYH3Q9C0H2 523 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 KLC2Q9H0B6 622 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 NCKIPSDQ9NZQ3 722 aa12.68□□□□□ -0.38
VAMP1-206ENST00000538970 IPO11Q9UI26 975 aaKnown RBP12.68□□□□□ -0.38
VAMP1-206ENST00000538970 ATMQ13315 3056 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 SIGLEC16A6NMB1 481 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 LGALS16A8MUM7 142 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 RIOK3O14730 519 aaKnown RBP12.67□□□□□ -0.38
VAMP1-206ENST00000538970 ARHGAP6O43182 974 aa12.67□□□□□ -0.38
VAMP1-206ENST00000538970 DXOO77932 396 aaKnown RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms