RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 OLIG2Q13516 323 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 AGKQ53H12 422 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 DALRD3Q5D0E6 543 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 ATF7IP2Q5U623 682 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 C8orf82Q6P1X6 216 aaPredicted RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 CCNYL1Q8N7R7 359 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 OLFM1Q99784 485 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 C9orf16Q9BUW7 83 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC25A23Q9BV35 468 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 RIC8BQ9NVN3 520 aa18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 RUVBL2Q9Y230 463 aaKnown RBP18.79■□□□□ 0.6
SFSWAP-207ENST00000538548 SNRPB2P08579 225 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 GSTT2P0CG29 244 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 GSTT2BP0CG30 244 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 ATP6V1B2P21281 511 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 LAMTOR4Q0VGL1 99 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 TRAF2Q12933 501 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 SEPT6Q14141 434 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 GRM3Q14832 879 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 CYP2A13Q16696 494 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 TBCELQ5QJ74 424 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 NIM1KQ8IY84 436 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 SPPL2BQ8TCT7 592 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 ATG4CQ96DT6 458 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 MFSD3Q96ES6 412 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 WNK4Q96J92 1243 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 MUC3BQ9H195 1237 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 LRRC4Q9HBW1 653 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 AGPAT4Q9NRZ5 378 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 ATAD3AQ9NVI7 634 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 GIN1Q9NXP7 522 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 NCKIPSDQ9NZQ3 722 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 CCDC167Q9P0B6 97 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 SPATA7Q9P0W8 599 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 RNF103-CHMP3A0A140T963 221 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 CLOCKO15516 846 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 MAP4P27816 1152 aaKnown RBP18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 TMBIM6P55061 237 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC12A1Q13621 1099 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 FKBP1CQ5VVH2 108 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 IER5Q5VY09 327 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 TMEM192Q8IY95 271 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 ANKRD13AQ8IZ07 590 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 CCDC185Q8N715 623 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 C12orf29Q8N999 325 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 PDPRQ8NCN5 879 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 KCTD4Q8WVF5 259 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 ZUFSPQ96AP4 578 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 NT5C1AQ9BXI3 368 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 C8orf4Q9NR00 106 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 XPR1Q9UBH6 696 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 SEPT3Q9UH03 358 aa18.78■□□□□ 0.6
SFSWAP-207ENST00000538548 UBDO15205 165 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 PHGDHO43175 533 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC35E2BP0CK96 405 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 HDCP19113 662 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 DNAJB1P25685 340 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC7A2P52569 658 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 MAP7D1Q3KQU3 841 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 ERO1BQ86YB8 467 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 ZDHHC17Q8IUH5 632 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 ZC3H7AQ8IWR0 971 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 FAM110BQ8TC76 370 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 PNPT1Q8TCS8 783 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 CYGBQ8WWM9 190 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 CASP10Q92851 521 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 HPDLQ96IR7 371 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 YTHDF1Q9BYJ9 559 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 C2orf40Q9H1Z8 148 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 RPAP3Q9H6T3 665 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 IARS2Q9NSE4 1012 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 RCOR3Q9P2K3 495 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 SFMBT1Q9UHJ3 866 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 GOLGA8TH3BQL2 631 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 NFKBIEO00221 500 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 DYNC1LI2O43237 492 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 NRP2O60462 931 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 CNOT3O75175 753 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 USP12O75317 370 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 MXD4Q14582 209 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 USP10Q14694 798 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 EEF1DP3Q658K8 133 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 PIWIL4Q7Z3Z4 852 aaKnown RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 CENPLQ8N0S6 344 aaPredicted RBP18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 DNAAF3Q8N9W5 541 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 SLC45A3Q96JT2 553 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 FAM49BQ9NUQ9 324 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 AURKCQ9UQB9 309 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 TCAF1Q9Y4C2 921 aa18.77■□□□□ 0.6
SFSWAP-207ENST00000538548 AQP12BA6NM10 295 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 ACKR2O00590 384 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 AP2A1O95782 977 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 SAT1P21673 171 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 JAK1P23458 1154 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 LRPAP1P30533 357 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 SNX16P57768 344 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 NME3Q13232 169 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 ITGADQ13349 1161 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 ATP6AP1Q15904 470 aa18.76■□□□□ 0.59
SFSWAP-207ENST00000538548 PKDCCQ504Y2 493 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms