RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 FNDC3AQ9Y2H6 1198 aaKnown RBP14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ARL5AQ9Y689 179 aa14.29□□□□□ -0.12
ACTN1-205ENST00000538545 ANKRD12Q6UB98 2062 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 FGBP02675 491 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 C8AP07357 584 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 RHOCP08134 193 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 MYL4P12829 197 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 SLC1A2P43004 574 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 SERPINB9P50453 376 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 IL10RBQ08334 325 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 BST1Q10588 318 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF470Q6ECI4 717 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 CYS1Q717R9 158 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 SLC41A1Q8IVJ1 513 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 TCEAL8Q8IYN2 117 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 MICALL1Q8N3F8 863 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 NSMCE1Q8WV22 266 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 FAM136AQ96C01 138 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 PRR11Q96HE9 360 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-205ENST00000538545 CPNE1Q99829 537 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 TSSK1BQ9BXA7 367 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 ENTPD7Q9NQZ7 604 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 CAPN7Q9Y6W3 813 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 K7ERQ8 282 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 HAUS5O94927 633 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 MT-CO1P00395 513 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 PDHA1P08559 390 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 IRS1P35568 1242 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 ARCN1P48444 511 aaKnown RBP14.28□□□□□ -0.12
ACTN1-205ENST00000538545 PARP15Q460N3 678 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 FAM219BQ5XKK7 198 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
ACTN1-205ENST00000538545 KLHDC8BQ8IXV7 354 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 PDCD6IPQ8WUM4 868 aaKnown RBP14.28□□□□□ -0.12
ACTN1-205ENST00000538545 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 COMMD8Q9NX08 183 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 CCL26Q9Y258 94 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 PCDHGC4Q9Y5F7 938 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 ALPK3Q96L96 1907 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 NOTCH4Q99466 2003 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 ITM2AO43736 263 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 LIMK2P53671 638 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 MSLNQ13421 630 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-205ENST00000538545 NUDCD3Q8IVD9 361 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 C7orf61Q8IZ16 206 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 TEX26Q8N6G2 289 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 PPHLN1Q8NEY8 458 aaKnown RBP14.28□□□□□ -0.12
ACTN1-205ENST00000538545 MTBPQ96DY7 904 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 TLR9Q9NR96 1032 aa14.28□□□□□ -0.12
ACTN1-205ENST00000538545 A0A096LPK6 155 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-205ENST00000538545 GREM1O60565 184 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 ATXN1LP0C7T5 689 aaKnown RBP14.27□□□□□ -0.12
ACTN1-205ENST00000538545 CTSAP10619 480 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 ALADP13716 330 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 CRHR1P34998 444 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 MAPKAPK2P49137 400 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 KPNA1P52294 538 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-205ENST00000538545 ZNF177Q13360 481 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-205ENST00000538545 FAM109BQ6ICB4 259 aaPredicted RBP14.27□□□□□ -0.12
ACTN1-205ENST00000538545 CNSTQ6PJW8 725 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 CEP97Q8IW35 865 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 OR13C4Q8NGS5 318 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 OR13J1Q8NGT2 312 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 RIN3Q8TB24 985 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 MICAL1Q8TDZ2 1067 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 MYLIPQ8WY64 445 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 ARL2BPQ9Y2Y0 163 aa14.27□□□□□ -0.12
ACTN1-205ENST00000538545 H0Y626 953 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 PER2O15055 1255 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 CD160O95971 181 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 C2P06681 752 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 ARRB2P32121 409 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 SERPINH1P50454 418 aaKnown RBP14.27□□□□□ -0.13
ACTN1-205ENST00000538545 CDH4P55283 916 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 OXCT1P55809 520 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 ARF5P84085 180 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 ITIH4Q14624 930 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 FASTKD1Q53R41 847 aaKnown RBP14.27□□□□□ -0.13
ACTN1-205ENST00000538545 TMEM240Q5SV17 173 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 RBM20Q5T481 1227 aaKnown RBP14.27□□□□□ -0.13
ACTN1-205ENST00000538545 TMCO4Q5TGY1 634 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 RAPH1Q70E73 1250 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 ZC3HC1Q86WB0 502 aaKnown RBP14.27□□□□□ -0.13
ACTN1-205ENST00000538545 BBS7Q8IWZ6 715 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 OR6P1Q8NGX9 317 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 NAT14Q8WUY8 206 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 POLR1EQ9GZS1 481 aaKnown RBP14.27□□□□□ -0.13
ACTN1-205ENST00000538545 TREX1Q9NSU2 369 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 KLHL14Q9P2G3 628 aa14.27□□□□□ -0.13
ACTN1-205ENST00000538545 FCF1Q9Y324 198 aaKnown RBP14.27□□□□□ -0.13
ACTN1-205ENST00000538545 GKP32189 559 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 SLC8A1P32418 973 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 SPRP35270 261 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-205ENST00000538545 SCTRP47872 440 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 YBEYP58557 167 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-205ENST00000538545 NTHL1P78549 312 aa14.26□□□□□ -0.13
ACTN1-205ENST00000538545 RABGAP1LQ5R372 815 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms