RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 MSI1O43347 362 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 KRT36O76013 467 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 MT-CYBP00156 380 aaPredicted RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 CA3P07451 260 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 RHOQP17081 205 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 TPH1P17752 444 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 GLDCP23378 1020 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 CPA2P48052 419 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 NDST2P52849 883 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 ALDH18A1P54886 795 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 MSLNQ13421 630 aaPredicted RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 UBAP2LQ14157 1087 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 MRPL58Q14197 206 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 DLG2Q15700 870 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 TRMT5Q32P41 509 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 CLLU1OSQ5K130 101 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 PIK3R6Q5UE93 754 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 METTL21CQ5VZV1 264 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 RWDD4Q6NW29 188 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 NAPRTQ6XQN6 538 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 MON1AQ86VX9 555 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 SCUBE1Q8IWY4 988 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 ARHGAP18Q8N392 663 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 TEX26Q8N6G2 289 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 C2CD4AQ8NCU7 369 aaPredicted RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 PPHLN1Q8NEY8 458 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 KCNV2Q8TDN2 545 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 WDR60Q8WVS4 1066 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 RILPQ96NA2 401 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 GATA5Q9BWX5 397 aaPredicted RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 PRKD2Q9BZL6 878 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 DRC3Q9H069 523 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 SIK2Q9H0K1 926 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 SLC25A51Q9H1U9 297 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 NMRAL1Q9HBL8 299 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 GPAMQ9HCL2 828 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 BATF3Q9NR55 127 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 TMEM248Q9NWD8 314 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 OXSMQ9NWU1 459 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 UBP1Q9NZI7 540 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 STX18Q9P2W9 335 aaKnown RBP9.36□□□□□ -0.91
DDB1-211ENST00000538280 STOML1Q9UBI4 398 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 ZNF212Q9UDV6 495 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 DNAJB4Q9UDY4 337 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 TLR6Q9Y2C9 796 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 MTCH2Q9Y6C9 303 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 VWA8A3KMH1 1905 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 BRWD1Q9NSI6 2320 aa9.36□□□□□ -0.91
DDB1-211ENST00000538280 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 A0A088AWK7 358 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 FAM86C2PA6NEL3 165 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 SYN3O14994 580 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 IGLV3-27P01718 113 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 AHSGP02765 367 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 F7P08709 466 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 OR4Q2P0C623 313 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 SLC35E2BP0CK96 405 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 SLC2A3P11169 496 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 CKBP12277 381 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ACADSP16219 412 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ATP6V1C1P21283 382 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 HOXD11P31277 338 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 GRIK1P39086 918 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 VHLP40337 213 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ABCG1P45844 678 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 PTDSS1P48651 473 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 TUBP50607 506 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 PAPOLAP51003 745 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 ACTR3P61158 418 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 SLC34A1Q06495 639 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 NSUN2Q08J23 767 aaKnown RBP eCLIP9.35□□□□□ -0.91
DDB1-211ENST00000538280 SLC12A1Q13621 1099 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 HNRNPDQ14103 355 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 MBTPS1Q14703 1052 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 NAA25Q14CX7 972 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 SMAD1Q15797 465 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 NFE2Q16621 373 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 SLC39A12Q504Y0 691 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 NOMO2Q5JPE7 1267 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ESRP1Q6NXG1 681 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 PGM2L1Q6PCE3 622 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 GLB1LQ6UWU2 654 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 TMCO2Q7Z6W1 182 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 DEFB128Q7Z7B8 93 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 GALNT7Q86SF2 657 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ADGRG6Q86SQ4 1221 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ZNF280BQ86YH2 543 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 MFSD6LQ8IWD5 586 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ULK2Q8IYT8 1036 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 CENPLQ8N0S6 344 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 NUP93Q8N1F7 819 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 ZNF781Q8N8C0 355 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 IPMKQ8NFU5 416 aa9.35□□□□□ -0.91
DDB1-211ENST00000538280 SREK1Q8WXA9 508 aaKnown RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 N4BP2L2Q92802 583 aaPredicted RBP9.35□□□□□ -0.91
DDB1-211ENST00000538280 FAM122AQ96E09 287 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms