RNA–Protein interactions for RNA: ENST00000537971.5

TSPAN9-206, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPAN9, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-206ENST00000537971 LCTP09848 1927 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 NCANO14594 1321 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3DA0A087WVF3 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3IA0A087WXS9 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3EA0A087X179 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3KA0A087X1G2 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3FA6NER0 549 aaPredicted RBP12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3LB9A6J9 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 RNASEH2AO75792 299 aaKnown RBP12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3HP0C7X1 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 ZFXP17010 805 aaPredicted RBP12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TARSP26639 723 aaKnown RBP12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 FNTAP49354 379 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3GQ6DHY5 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3CQ6IPX1 549 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TBC1D3Q8IZP1 549 aaPredicted RBP12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 CAMKK1Q8N5S9 505 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 IFT43Q96FT9 208 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 C10orf88Q9H8K7 445 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 FBRSQ9HAH7 460 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 TMBIM4Q9HC24 238 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 ZSCAN32Q9NX65 697 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 ELOVL2Q9NXB9 296 aa12.4□□□□□ -0.43
TSPAN9-206ENST00000537971 SDK1Q7Z5N4 2213 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 PAMP19021 973 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 HNRNPH3P31942 346 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 SNRPD1P62314 119 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 RPL6Q02878 288 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 TRADDQ15628 312 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 CLEC16AQ2KHT3 1053 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 ZNF776Q68DI1 518 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 ARMCX6Q7L4S7 300 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 SLC26A9Q7LBE3 791 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 TRIML2Q8N7C3 387 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 TERB1Q8NA31 727 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 TFAP2BQ92481 460 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 NDRG1Q92597 394 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 APOL2Q9BQE5 337 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 WWP1Q9H0M0 922 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 B2RBV5 119 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 PIAS1O75925 651 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 ENDOD1O94919 500 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 SYPP08247 313 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 HMGA1P17096 107 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 CCDC142Q17RM4 750 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 FSCBQ5H9T9 825 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 RMDN1Q96DB5 314 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 HHIPQ96QV1 700 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 SLC32A1Q9H598 525 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 SYNDIG1Q9H7V2 258 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 GGA2Q9UJY4 613 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 MYH10P35580 1976 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 KCNU1A8MYU2 1149 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 RARAP10276 462 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 TCN1P20061 433 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 TAC1P20366 129 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 PAPOLAP51003 745 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 C11orf63Q6NUN7 778 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 ERAP2Q6P179 960 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 CCDC138Q96M89 665 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 BTBD1Q9H0C5 482 aa12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 PIH1D1Q9NWS0 290 aaKnown RBP12.39□□□□□ -0.43
TSPAN9-206ENST00000537971 FSBPO95073 299 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 LMNAP02545 664 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 IGFBP6P24592 240 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 EIF2DP41214 584 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 TNFRSF4P43489 277 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 RENBPP51606 427 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 NOP9Q86U38 636 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 TAC4Q86UU9 113 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 CFAP52Q8N1V2 620 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 FCRL2Q96LA5 508 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 CRISPLD1Q9H336 500 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 PPP1R12AO14974 1030 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 PRNPP04156 253 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 RPL21P46778 160 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 HTR3DQ70Z44 454 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 LZTR1Q8N653 840 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 PJA1Q8NG27 643 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 TMEM174Q8WUU8 243 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 ZNF669Q96BR6 464 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 TPSD1Q9BZJ3 242 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 NDE1Q9NXR1 346 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 ERVW-1Q9UQF0 538 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 FRMPD3Q5JV73 1810 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 GOLGA8QA0A0J9YX86 632 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 GOLGA8OA6NCC3 632 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 GOLGA8NF8WBI6 632 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 STC2O76061 302 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 CYP17A1P05093 508 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 ENO3P13929 434 aaPredicted RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 CCR2P41597 374 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 CDH4P55283 916 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 RING1Q06587 406 aa12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 USP10Q14694 798 aaKnown RBP12.38□□□□□ -0.43
TSPAN9-206ENST00000537971 SLC25A52Q3SY17 297 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms