RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 ZIM3Q96PE6 472 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 EBNA1BP2Q99848 306 aaKnown RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 FICDQ9BVA6 458 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 PIH1D1Q9NWS0 290 aaKnown RBP11.87□□□□□ -0.51
SPARC-207ENST00000537849 ELOVL2Q9NXB9 296 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 GOLGA6AQ9NYA3 693 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 DEC1Q9P2X7 70 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 KIAA1549LQ6ZVL6 1849 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 F5P12259 2224 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 ATG2BQ96BY7 2078 aa11.87□□□□□ -0.51
SPARC-207ENST00000537849 PRRT4C9JH25 899 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 TIMM44O43615 452 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 ATP9BO43861 1147 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 PRLP01236 227 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 SERPINF2P08697 491 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 FOSL2P15408 326 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 TSHRP16473 764 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 SP100P23497 879 aaPredicted RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 MGAT1P26572 445 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 RHOAP61586 193 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 DLG2Q15700 870 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 AAK1Q2M2I8 961 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 ITPRIPL2Q3MIP1 535 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 CCDC38Q502W7 563 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 RALGPS1Q5JS13 557 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 HABP4Q5JVS0 413 aaKnown RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 CERCAMQ5T4B2 595 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 ATXN7L2Q5T6C5 722 aaPredicted RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 NAIF1Q69YI7 327 aaPredicted RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 GRAMD4Q6IC98 578 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 KDELC2Q7Z4H8 507 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 METTL3Q86U44 580 aaKnown RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 RNF135Q8IUD6 432 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 FRS2Q8WU20 508 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 SORCS1Q8WY21 1168 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 HLA-CQ95604 372 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 MYO19Q96H55 970 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 FEM1CQ96JP0 617 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 EXOC2Q96KP1 924 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 TTC25Q96NG3 672 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 TRIB3Q96RU7 358 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 PHF7Q9BWX1 381 aaPredicted RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 SCUBE2Q9NQ36 999 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 HAUS2Q9NVX0 235 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 LIMD1Q9UGP4 676 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 PLAAQ9Y263 795 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.86□□□□□ -0.51
SPARC-207ENST00000537849 MYLKQ15746 1914 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 TICRRQ7Z2Z1 1910 aa11.86□□□□□ -0.51
SPARC-207ENST00000537849 COL4A3Q01955 1670 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 MAGEB16A2A368 324 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 AP3B1O00203 1094 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 ACSL3O95573 720 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SHBGP04278 402 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 ASLP04424 464 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SRPRAP08240 638 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 ABHD2P08910 425 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 NUDT17P0C025 328 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 ATXN1LP0C7T5 689 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 SSTR1P30872 391 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 EIF2DP41214 584 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 CHRNA4P43681 627 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 CRADDP78560 199 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 CDK18Q07002 472 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 CDH17Q12864 832 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SKIV2LQ15477 1246 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 SLC1A5Q15758 541 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SMAD2Q15796 467 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 PCSK7Q16549 785 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 PTPRNQ16849 979 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 MYLK3Q32MK0 819 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 LEXMQ3ZCV2 418 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SIRPB2Q5JXA9 342 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 STEAP4Q687X5 459 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 C3orf62Q6ZUJ4 267 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SFTPA1Q8IWL2 248 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 PLCD3Q8N3E9 789 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SLC44A3Q8N4M1 653 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SLC25A41Q8N5S1 370 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 OR2W6PQ8NHA6 318 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 UHMK1Q8TAS1 419 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 CYB5D2Q8WUJ1 264 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 NXPE3Q969Y0 559 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 TMEM109Q9BVC6 243 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 CEP44Q9C0F1 390 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 KCNK12Q9HB15 430 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 FBRSL1Q9HCM7 1045 aaKnown RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 TRPV5Q9NQA5 729 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 SYBUQ9NX95 663 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 FAM53CQ9NYF3 392 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 BFARQ9NZS9 450 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 EVLQ9UI08 416 aaPredicted RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 SLC25A13Q9UJS0 675 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 HCN2Q9UL51 889 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 CHMP2BQ9UQN3 213 aa11.85□□□□□ -0.51
SPARC-207ENST00000537849 ARIH1Q9Y4X5 557 aaPredicted RBP11.85□□□□□ -0.51
SPARC-207ENST00000537849 PCDHGC4Q9Y5F7 938 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms