RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TSNAXIP1Q2TAA8 658 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 CFAP157Q5JU67 520 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 TMCO4Q5TGY1 634 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 NADSYN1Q6IA69 706 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 TAS1R1Q7RTX1 841 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 TMEM173Q86WV6 379 aaPredicted RBP15.83■□□□□ 0.12
MKS1-204ENST00000537529 BCL7CQ8WUZ0 217 aaPredicted RBP15.83■□□□□ 0.12
MKS1-204ENST00000537529 KCTD4Q8WVF5 259 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 TADA1Q96BN2 335 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 CDH19Q9H159 772 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 RNPEPL1Q9HAU8 725 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 CPSF2Q9P2I0 782 aaKnown RBP15.83■□□□□ 0.12
MKS1-204ENST00000537529 DNMT3LQ9UJW3 386 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 RUVBL2Q9Y230 463 aaKnown RBP15.83■□□□□ 0.12
MKS1-204ENST00000537529 L3MBTL1Q9Y468 752 aa15.83■□□□□ 0.12
MKS1-204ENST00000537529 ATF6P18850 670 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 AOC1P19801 751 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 KPNA2P52292 529 aaKnown RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 GTF2A1P52655 376 aaPredicted RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 SLC12A2P55011 1212 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 RABGAP1LQ5R372 815 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 LIPMQ5VYY2 423 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 LRRC8EQ6NSJ5 796 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 NAPRTQ6XQN6 538 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 MAVSQ7Z434 540 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 TMPRSS6Q8IU80 811 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 LGI2Q8N0V4 545 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 PDZD8Q8NEN9 1154 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 FBXO22Q8NEZ5 403 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 DENND2DQ9H6A0 471 aaPredicted RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 EBF2Q9HAK2 575 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 MTRRQ9UBK8 725 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 PCNTO95613 3336 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 TTC3P53804 2025 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 B2RBV5 119 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 TK2O00142 265 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 PRAMEF11O60813 436 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 PQBP1O60828 265 aaKnown RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 PEX11AO75192 247 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 LMNAP02545 664 aaKnown RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 POU4F1Q01851 419 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 ASPHQ12797 758 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 UBAP2LQ14157 1087 aaKnown RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 ZNF235Q14590 738 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 ATG14Q6ZNE5 492 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 CENPLQ8N0S6 344 aaPredicted RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 GPATCH11Q8N954 259 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 ARRDC2Q8TBH0 407 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 STYXQ8WUJ0 223 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 OVCA2Q8WZ82 227 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 ZNF599Q96NL3 588 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 GATA5Q9BWX5 397 aaPredicted RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 POLR1EQ9GZS1 481 aaKnown RBP15.82■□□□□ 0.12
MKS1-204ENST00000537529 RETREG1Q9H6L5 497 aa15.82■□□□□ 0.12
MKS1-204ENST00000537529 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.81■□□□□ 0.12
MKS1-204ENST00000537529 PRR5-ARHGAP8B1AHC4 643 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.81■□□□□ 0.12
MKS1-204ENST00000537529 ZNF195O14628 629 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 ATP5C1P36542 298 aaKnown RBP15.81■□□□□ 0.12
MKS1-204ENST00000537529 ACVRL1P37023 503 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 ETFBP38117 255 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 CPA2P48052 419 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 TUFMP49411 452 aaKnown RBP15.81■□□□□ 0.12
MKS1-204ENST00000537529 CLCN5P51795 746 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 HK2P52789 917 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 ARHGAP8P85298 464 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 DNAL1Q4LDG9 190 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 SLC8B1Q6J4K2 584 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 MFSD6LQ8IWD5 586 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 PGBD5Q8N414 524 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 NUDCD1Q96RS6 583 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 NACA2Q9H009 215 aa15.81■□□□□ 0.12
MKS1-204ENST00000537529 UXTQ9UBK9 157 aaPredicted RBP15.81■□□□□ 0.12
MKS1-204ENST00000537529 ACSL4O60488 711 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 DIAPH2O60879 1101 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 MAP2K2P36507 400 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 PGM1P36871 562 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 GLRBP48167 497 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 SLC11A2P49281 568 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 ALDH7A1P49419 539 aaKnown RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 KCNQ1P51787 676 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 KDSRQ06136 332 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 LAMB3Q13751 1172 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 C5orf22Q49AR2 442 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 SIRPB2Q5JXA9 342 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 RFWD3Q6PCD5 774 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 GALNT7Q86SF2 657 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 CEP97Q8IW35 865 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 ZNF781Q8N8C0 355 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 TDRD5Q8NAT2 981 aaKnown RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 ZNF296Q8WUU4 475 aaPredicted RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 TSPAN17Q96FV3 270 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 SCLYQ96I15 445 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 ILKAPQ9H0C8 392 aaPredicted RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 UNC93B1Q9H1C4 597 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.8■□□□□ 0.12
MKS1-204ENST00000537529 BACE2Q9Y5Z0 518 aa15.8■□□□□ 0.12
MKS1-204ENST00000537529 MYLKQ15746 1914 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms