RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 CYB5D2Q8WUJ1 264 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SLC20A1Q8WUM9 679 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 PIGKQ92643 395 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 TTC17Q96AE7 1141 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 WDR89Q96FK6 387 aaPredicted RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 SIPA1Q96FS4 1042 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 ERGIC2Q96RQ1 377 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 PRMT1Q99873 361 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 EDEM2Q9BV94 578 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 HSD3B7Q9H2F3 369 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 PDCL3Q9H2J4 239 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 EPB41L4BQ9H329 900 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 PRDM16Q9HAZ2 1276 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 CD93Q9NPY3 652 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 RXFP3Q9NSD7 469 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.25□□□□□ -1.25
YBX3-206ENST00000536823 COX16Q9P0S2 106 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 SLC12A6Q9UHW9 1150 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 EVLQ9UI08 416 aaPredicted RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 PCOLCE2Q9UKZ9 415 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 INTS6Q9UL03 887 aaKnown RBP7.25□□□□□ -1.25
YBX3-206ENST00000536823 PLA2G4CQ9UP65 541 aa7.25□□□□□ -1.25
YBX3-206ENST00000536823 A0A1B0GVM2 712 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 MED19A0JLT2 244 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 PATE3B3GLJ2 98 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 ETV2O00321 342 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 GFPT2O94808 682 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 IGLV3-19P01714 112 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 PF4P02776 101 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 MMEP08473 750 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 GSTP1P09211 210 aaKnown RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 HLA-EP13747 358 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 ABCB4P21439 1286 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CD6P30203 668 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CSKP41240 450 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 STAT1P42224 750 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 FMO1Q01740 532 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CDR2Q01850 454 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 NME3Q13232 169 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 MTA1Q13330 715 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 PLEKHG6Q3KR16 790 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 FSCBQ5H9T9 825 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 PITRM1Q5JRX3 1037 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 BRMS1LQ5PSV4 323 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 FAM102AQ5T9C2 384 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 IL31Q6EBC2 164 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CAVIN1Q6NZI2 390 aaKnown RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 TRIM72Q6ZMU5 477 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 MMS22LQ6ZRQ5 1243 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 ERICH1Q86X53 443 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CIR1Q86X95 450 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 TMPRSS6Q8IU80 811 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CFAP52Q8N1V2 620 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 CARNMT1Q8N4J0 409 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 ZNF366Q8N895 744 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 KDM1BQ8NB78 822 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 NEK11Q8NG66 645 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 PRCCQ92733 491 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 NT5C3BQ969T7 300 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 C18orf8Q96DM3 657 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 PGAP3Q96FM1 320 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 HSPA12BQ96MM6 686 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 SPAG5Q96R06 1193 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 NPY6RQ99463 290 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 SPON2Q9BUD6 331 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 NLRC4Q9NPP4 1024 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 PIGVQ9NUD9 493 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 TMEM51Q9NW97 253 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 WSB2Q9NYS7 404 aaPredicted RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.24□□□□□ -1.25
YBX3-206ENST00000536823 PILRBQ9UKJ0 227 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 STAP1Q9ULZ2 295 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 ITIH6Q6UXX5 1313 aa7.24□□□□□ -1.25
YBX3-206ENST00000536823 ATXN2Q99700 1313 aaKnown RBP7.24□□□□□ -1.25
YBX3-206ENST00000536823 FRYQ5TBA9 3013 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 DOCK4Q8N1I0 1966 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 PCDH15Q96QU1 1955 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 H0Y626 953 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 GOLGA8SH3BPF8 625 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 M0QYT0 321 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 NDUFS2O75306 463 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 MOCS3O95396 460 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 F9P00740 461 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CYP1A1P04798 512 aaPredicted RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 ACADMP11310 421 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ATP1A3P13637 1013 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 PDGFRAP16234 1089 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CHRNB2P17787 502 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CDK11BP21127 795 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 MMP8P22894 467 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 FLT3P36888 993 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 CXCR3P49682 368 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 SULT1E1P49888 294 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 TPMTP51580 245 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 RNASE9P60153 205 aaKnown RBP7.23□□□□□ -1.25
YBX3-206ENST00000536823 ST8SIA6P61647 398 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 UBXN1Q04323 297 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ZBTB16Q05516 673 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 DEUP1Q05D60 604 aa7.23□□□□□ -1.25
YBX3-206ENST00000536823 ZNF33AQ06730 810 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms