RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PTP4A2Q12974 167 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PDE1CQ14123 709 aaPredicted RBP19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 MYLK3Q32MK0 819 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CDCP2Q5VXM1 449 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 LEKR1Q6ZMV7 388 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CLEC17AQ6ZS10 378 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 DENND6BQ8NEG7 585 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ZNF548Q8NEK5 533 aaPredicted RBP19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NTAN1Q96AB6 310 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 DEPDC7Q96QD5 511 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PCDHB18PQ96TA0 734 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SELENOOQ9BVL4 669 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ABCG4Q9H172 646 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ADAM22Q9P0K1 906 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GGT7Q9UJ14 662 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CSNK1G3Q9Y6M4 447 aa19.98■□□□□ 0.79
TNFRSF1B-204ENST00000536782 LY6G6EA0A0G2JKS1 128 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ZSCAN5CA6NGD5 496 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KDELR3O43731 214 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GPD1P21695 349 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RFC1P35251 1148 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GSCP56915 257 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 TBC1D25Q3MII6 688 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ZCCHC8Q6NZY4 707 aaKnown RBP19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SLFN11Q7Z7L1 901 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ZNF354CQ86Y25 554 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KLHL32Q96NJ5 620 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 UBL7Q96S82 380 aaPredicted RBP19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PRORYQ9H606 182 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ITM2BQ9Y287 266 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 SIK3Q9Y2K2 1263 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PCDHB1Q9Y5F3 818 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 U3KQA8 63 aa19.97■□□□□ 0.79
TNFRSF1B-204ENST00000536782 BUB1O43683 1085 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CALB1P05937 261 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 JUNDP17535 347 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RAD51Q06609 339 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 CLEC16AQ2KHT3 1053 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 ATXN7L2Q5T6C5 722 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 WDR59Q6PJI9 974 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GDPD4Q6W3E5 623 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 TTC7BQ86TV6 843 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PHF13Q86YI8 300 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 C3orf20Q8ND61 904 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 VOPP1Q96AW1 172 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 PCMTD1Q96MG8 357 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 GDAP1L1Q96MZ0 367 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 FANCLQ9NW38 375 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 NCKIPSDQ9NZQ3 722 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 KLF15Q9UIH9 416 aa19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 COL27A1Q8IZC6 1860 aaPredicted RBP19.96■□□□□ 0.79
TNFRSF1B-204ENST00000536782 RP1P56715 2156 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 FLNBO75369 2602 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SIGLEC16A6NMB1 481 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RIOK3O14730 519 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 AREL1O15033 823 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SPINT1O43278 529 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 AQP9O43315 295 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TMCC1O94876 653 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 EPHB2P29323 1055 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PFN3P60673 137 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PTK2BQ14289 1009 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SYCP1Q15431 976 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TPRG1LQ5T0D9 272 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RTL3Q8N8U3 475 aaKnown RBP19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 NEK11Q8NG66 645 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 IFI44Q8TCB0 444 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MAPK15Q8TD08 544 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LMX1AQ8TE12 382 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 BTN2A2Q8WVV5 523 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CASKIN2Q8WXE0 1202 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CENPTQ96BT3 561 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 FCRL3Q96P31 734 aaPredicted RBP19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TTYH3Q9C0H2 523 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 RAI2Q9Y5P3 530 aa19.95■□□□□ 0.78
TNFRSF1B-204ENST00000536782 KIF26BQ2KJY2 2108 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ANKRD62A6NC57 917 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 USP12O75317 370 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CSO75390 466 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 IGSF6O95976 241 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 MPOP05164 745 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 THOP1P52888 689 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 COPB1P53618 953 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CCDC173Q0VFZ6 552 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 EIF2B5Q13144 721 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 INO80DQ53TQ3 878 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 EFHC2Q5JST6 749 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SCYL2Q6P3W7 929 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LSMEM2Q8N112 164 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 PYROXD2Q8N2H3 581 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ANKRD20A12PQ8NF67 263 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 ZNF578Q96N58 590 aaPredicted RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 IL12RB2Q99665 862 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 NOL6Q9H6R4 1146 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 LMBRD1Q9NUN5 540 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SEPT11Q9NVA2 429 aaKnown RBP19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SPASTQ9UBP0 616 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 SALL4Q9UJQ4 1053 aa19.94■□□□□ 0.78
TNFRSF1B-204ENST00000536782 CPED1A4D0V7 1026 aa19.93■□□□□ 0.78
TNFRSF1B-204ENST00000536782 TPP1O14773 563 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms