RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PSTKQ8IV42 348 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SLC35G2Q8TBE7 412 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 IP6K2Q9UHH9 426 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 LCMT1Q9UIC8 334 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ZFR2Q9UPR6 939 aaKnown RBP18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ADGRG1Q9Y653 693 aa18.14■□□□□ 0.49
TNFRSF1A-209ENST00000536717 AKAP13Q12802 2813 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 A0A1W2PQU0 124 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TOP3BO95985 862 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CCDC175P0C221 793 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ADRB3P13945 408 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CCT8P50990 548 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NDST2P52849 883 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 KIF5AQ12840 1032 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TRIP6Q15654 476 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SETMARQ53H47 684 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PPP6R3Q5H9R7 873 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 RFX8Q6ZV50 586 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 HORMAD1Q86X24 394 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 RYBPQ8N488 228 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 MFSD2AQ8NA29 543 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 BAHD1Q8TBE0 780 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CASKIN2Q8WXE0 1202 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 KLK6Q92876 244 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SKA1Q96BD8 255 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CELF6Q96J87 481 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 LRIG1Q96JA1 1093 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 BTBD6Q96KE9 485 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ZNF830Q96NB3 372 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NCAPGQ9BPX3 1015 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PDFQ9HBH1 243 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CA5BQ9Y2D0 317 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PLXNB3Q9ULL4 1909 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 KNTC1P50748 2209 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 A0A0A6YYK5 440 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 A0A1B0GTQ1 180 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TLR4O00206 839 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 FLRT2O43155 660 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PCDHGA12O60330 932 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 POP4O95707 220 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ERCC2P18074 760 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NOP2P46087 812 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PIGHQ14442 188 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TCEAL1Q15170 157 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SMTNL2Q2TAL5 461 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ZNF284Q2VY69 593 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 MYLK3Q32MK0 819 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TMEM145Q8NBT3 493 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SETD7Q8WTS6 366 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ELF4Q99607 663 aaPredicted RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SLC39A8Q9C0K1 460 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 KCNF1Q9H3M0 494 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 DONSONQ9NYP3 566 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CWC15Q9P013 229 aaKnown RBP18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TFR2Q9UP52 801 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PCDHB9Q9Y5E1 797 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 FADS3Q9Y5Q0 445 aa18.13■□□□□ 0.49
TNFRSF1A-209ENST00000536717 COL5A1P20908 1838 aaPredicted RBP18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PRAMEF26H0Y7S4 382 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 J3KR12 359 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 KRIT1O00522 736 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SLC31A1O15431 190 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PJA2O43164 708 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 MTA2O94776 668 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PCDH8O95206 1070 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 UGT2B4P06133 528 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PRLRP16471 622 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ABL2P42684 1182 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NXPH1P58417 271 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 IL9RQ01113 521 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CYTH1Q15438 398 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SHBQ15464 509 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 DPYSL2Q16555 572 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TMEM259Q4ZIN3 620 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SLC45A4Q5BKX6 768 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ZNF805Q5CZA5 627 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 AFMIDQ63HM1 303 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SEL1L3Q68CR1 1132 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 TXNRD3NBQ6F5E7 133 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 FBXL19Q6PCT2 694 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SPATS2Q86XZ4 545 aaKnown RBP18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ARHGAP12Q8IWW6 846 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NPWQ8N729 165 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 NIPA2Q8N8Q9 360 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 GDAP1L1Q96MZ0 367 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 MYOCQ99972 504 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 GDF3Q9NR23 364 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 LHX3Q9UBR4 397 aa18.12■□□□□ 0.49
TNFRSF1A-209ENST00000536717 CACNA1BQ00975 2339 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 RCCD1A6NED2 376 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 C16orf96A6NNT2 1141 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 BTNL10A8MVZ5 291 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 AP1G1O43747 822 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 DFNA5O60443 496 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PRAMEF11O60813 436 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 SPINK2P20155 84 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 HCAR3P49019 387 aa18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 PAPOLAP51003 745 aaKnown RBP18.11■□□□□ 0.49
TNFRSF1A-209ENST00000536717 ZNF135P52742 658 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms