RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 CIPCQ9C0C6 399 aa23.2■■□□□ 1.3
RBFOX1-206ENST00000535565 CEP44Q9C0F1 390 aa23.2■■□□□ 1.3
RBFOX1-206ENST00000535565 EPB41L4BQ9H329 900 aa23.2■■□□□ 1.3
RBFOX1-206ENST00000535565 PIH1D1Q9NWS0 290 aaKnown RBP23.2■■□□□ 1.3
RBFOX1-206ENST00000535565 MAD1L1Q9Y6D9 718 aa23.2■■□□□ 1.3
RBFOX1-206ENST00000535565 GJB3O75712 270 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 IGSF6O95976 241 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 TSHRP16473 764 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 CA4P22748 312 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 MGAT1P26572 445 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 GJA4P35212 333 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 PHBP35232 272 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 EIF2DP41214 584 aaKnown RBP23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 MAPK8P45983 427 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 TMEM215Q68D42 235 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 CASC4Q6P4E1 433 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 RANBP10Q6VN20 620 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 RNF135Q8IUD6 432 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 IQCKQ8N0W5 287 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 PLCD3Q8N3E9 789 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 TTC8Q8TAM2 541 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 FEM1CQ96JP0 617 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 ZIM3Q96PE6 472 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 EBNA1BP2Q99848 306 aaKnown RBP23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 NAT9Q9BTE0 207 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 TM6SF2Q9BZW4 377 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 VPS37BQ9H9H4 285 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 SAMD15Q9P1V8 674 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 SLC8A2Q9UPR5 921 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 ERVW-1Q9UQF0 538 aa23.19■■□□□ 1.3
RBFOX1-206ENST00000535565 C2CD4DB7Z1M9 353 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ABHD2P08910 425 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 NUDT17P0C025 328 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 SLC6A11P48066 632 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 CSNK1DP48730 415 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 AP1S1P61966 158 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 SNRPD1P62314 119 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 KDSRQ06136 332 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 IFFO1Q0D2I5 559 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 EIF4HQ15056 248 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ACCSLQ4AC99 568 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 C22orf39Q6P5X5 142 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 KDELC2Q7Z4H8 507 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 SRLQ86TD4 932 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 CCNJLQ8IV13 435 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 PCDH20Q8N6Y1 951 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 CSGALNACT1Q8TDX6 532 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 STAMBPL1Q96FJ0 436 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 WDR83Q9BRX9 315 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 PHF7Q9BWX1 381 aaPredicted RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 IL22Q9GZX6 179 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 LRRC4CQ9HCJ2 640 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ZC3H7BQ9UGR2 993 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ARNTLO00327 626 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 TIMM44O43615 452 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 SPAG6O75602 509 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 EPOP01588 193 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 SRPRAP08240 638 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 EIF3BP55884 814 aaKnown RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 FAM193AP78312 1265 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 CDK18Q07002 472 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ATXN7L2Q5T6C5 722 aaPredicted RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 NCEH1Q6PIU2 408 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 LRIG3Q6UXM1 1119 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 AGGF1Q8N302 714 aaeCLIP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 MPP5Q8N3R9 675 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 NXPE3Q969Y0 559 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ARNT2Q9HBZ2 717 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 SYBUQ9NX95 663 aa23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 ARIH1Q9Y4X5 557 aaPredicted RBP23.18■■□□□ 1.3
RBFOX1-206ENST00000535565 A0A087WUV0 522 aaPredicted RBP23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 DLDP09622 509 aaKnown RBP23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 HLA-DPA1P20036 260 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 OPRD1P41143 372 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 VASPP50552 380 aaPredicted RBP23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 IHHQ14623 411 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 SLC1A5Q15758 541 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 IGDCC3Q8IVU1 814 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 TERB1Q8NA31 727 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 OR2AP1Q8NGE2 309 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 CFAP36Q96G28 342 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 ELOVL2Q9NXB9 296 aa23.17■■□□□ 1.3
RBFOX1-206ENST00000535565 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 LOC285095A0A1B0GVY8 99 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 GSRP00390 522 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 GSTA2P09210 222 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 ST8SIA6P61647 398 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 GPS2Q13227 327 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 DLG2Q15700 870 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 DGKKQ5KSL6 1271 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 UBAP2Q5T6F2 1119 aaKnown RBP23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 DENND5AQ6IQ26 1287 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 CAPN12Q6ZSI9 719 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 C3orf62Q6ZUJ4 267 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 NUDT18Q6ZVK8 323 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 SLC25A41Q8N5S1 370 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 UHMK1Q8TAS1 419 aaKnown RBP23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 CYB5D2Q8WUJ1 264 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 TNKS2Q9H2K2 1166 aa23.16■■□□□ 1.3
RBFOX1-206ENST00000535565 PLA2G4CQ9UP65 541 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms