RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LIFRP42702 1097 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 CENPAP49450 140 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 ART1P52961 327 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 SLC18A2Q05940 514 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 FAM27E3Q08E93 113 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 LPIN1Q14693 890 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 TYW3Q6IPR3 259 aaKnown RBP5.34□□□□□ -1.55
PRKDC-205ENST00000535375 CREB3L2Q70SY1 520 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 LURAP1LQ8IV03 231 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 DENND6AQ8IWF6 608 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 FAM216AQ8WUB2 273 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 RAB40AQ8WXH6 277 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 REEP2Q9BRK0 252 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.34□□□□□ -1.55
PRKDC-205ENST00000535375 TAOK3Q9H2K8 898 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 SLC32A1Q9H598 525 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 RIC8AQ9NPQ8 531 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 PCDHGB5Q9Y5G0 923 aa5.34□□□□□ -1.55
PRKDC-205ENST00000535375 A0A1B0GVM2 712 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 PER2O15055 1255 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 DCTDP32321 178 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 HDAC4P56524 1084 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 ST3GAL1Q11201 340 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 RUNX2Q13950 521 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 IZUMO4Q1ZYL8 232 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 EFHC1Q5JVL4 640 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 ADGRG6Q86SQ4 1221 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 MON1AQ86VX9 555 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 DCP1BQ8IZD4 617 aaKnown RBP5.33□□□□□ -1.56
PRKDC-205ENST00000535375 CLIP4Q8N3C7 705 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 WASF1Q92558 559 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 YME1L1Q96TA2 773 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 SLC25A33Q9BSK2 321 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 MSTO1Q9BUK6 570 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 LMAN2LQ9H0V9 348 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 EPHX3Q9H6B9 360 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 TMEM51Q9NW97 253 aa5.33□□□□□ -1.56
PRKDC-205ENST00000535375 LINC01553A4QN01 128 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 FAM90A7PA6NKC0 464 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 FAM90A22PA8MWA6 464 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 FAM90A12PA8MX19 464 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 FAM90A23PA8MXZ1 464 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 ATP2C2O75185 946 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 HSD3B1P14060 373 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 SEC61A1P61619 476 aaKnown RBP5.32□□□□□ -1.56
PRKDC-205ENST00000535375 YWHAZP63104 245 aaKnown RBP5.32□□□□□ -1.56
PRKDC-205ENST00000535375 ADORA2A-AS1P86434 159 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 UBE3AQ05086 875 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 WDR45BQ5MNZ6 344 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 ATG16L1Q676U5 607 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 CES5AQ6NT32 575 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 NEK10Q6ZWH5 1172 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 MB21D2Q8IYB1 491 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-205ENST00000535375 TCP11L2Q8N4U5 519 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 SMRP1Q8NCR6 262 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 RFWD2Q8NHY2 731 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 GPT2Q8TD30 523 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 TMED6Q8WW62 240 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 RTP4Q96DX8 246 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 FAM84BQ96KN1 310 aaPredicted RBP5.32□□□□□ -1.56
PRKDC-205ENST00000535375 PCDHGB1Q9Y5G3 927 aa5.32□□□□□ -1.56
PRKDC-205ENST00000535375 EIF3FO00303 357 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 GUCY1B2O75343 617 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 SLC2A4P14672 509 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 ZNF8P17098 575 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 PGM1P36871 562 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 RPL3P39023 403 aaKnown RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 PPM1FP49593 454 aaPredicted RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 BLKP51451 505 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 CLCN5P51795 746 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 RRP1P56182 461 aaKnown RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 CYP4A11Q02928 519 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 CTTNQ14247 550 aaKnown RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 MAP3K21Q5TCX8 1036 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 KLHL24Q6TFL4 600 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 C18orf65Q6ZTR6 163 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 BABAM1Q9NWV8 329 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 ANKRD10Q9NXR5 420 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 IL1RAPL1Q9NZN1 696 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 AGO1Q9UL18 857 aaKnown RBP5.31□□□□□ -1.56
PRKDC-205ENST00000535375 GPR52Q9Y2T5 361 aa5.31□□□□□ -1.56
PRKDC-205ENST00000535375 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-205ENST00000535375 DENND3A2RUS2 1198 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CLEC18AA5D8T8 446 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 PRR23D1E9PI22 279 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-205ENST00000535375 EBAG9O00559 213 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 MTA2O94776 668 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 PRR23D2P0DMB1 279 aaPredicted RBP5.3□□□□□ -1.56
PRKDC-205ENST00000535375 PCNAP12004 261 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 ITGB8P26012 769 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 TTKP33981 857 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 GPD2P43304 727 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 CCT5P48643 541 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 MXI1P50539 228 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 PEX5P50542 639 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 SLC39A14Q15043 492 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 ARHGEF6Q15052 776 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 NFIL3Q16649 462 aa5.3□□□□□ -1.56
PRKDC-205ENST00000535375 MOB3CQ70IA8 216 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms