RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 ABRQ12979 859 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 PLPPR4Q7Z2D5 763 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CHPFQ8IZ52 775 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SIX5Q8N196 739 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 KIFC1Q9BW19 673 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SLC4A5Q9BY07 1137 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 ANKZF1Q9H8Y5 726 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CYLDQ9NQC7 956 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CHKBQ9Y259 395 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SLC27A6Q9Y2P4 619 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 RPL4P36578 427 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CRYBB1P53674 252 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 KLHL17Q6TDP4 642 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 ACO2Q99798 780 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 RPS6KA6Q9UK32 745 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 ST3GAL5Q9UNP4 418 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CORO2BQ9UQ03 480 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 GSTK1Q9Y2Q3 226 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 TNFAIP8O95379 198 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CRADDP78560 199 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 NEK5Q6P3R8 708 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SH3BP5LQ7L8J4 393 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CERS2Q96G23 380 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 PPP3R2Q96LZ3 170 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 CDT1Q9H211 546 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 GPN3Q9UHW5 284 aaPredicted RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 TMEM191CA6NGB0 347 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 SLC28A1O00337 649 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 PEX11AO75192 247 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 ULK1O75385 1050 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 HNMTP50135 292 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 RGMBQ6NW40 437 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 ULK2Q8IYT8 1036 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 PCDH20Q8N6Y1 951 aaKnown RBP18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 BSNDQ8WZ55 320 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 MYLK2Q9H1R3 596 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 KCNK4Q9NYG8 393 aa18.32■□□□□ 0.52
SFSWAP-203ENST00000535236 GTPBP1O00178 669 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 NR2F1P10589 423 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 SPANXN2Q5MJ10 180 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 EPS8L1Q8TE68 723 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 OR8D1Q8WZ84 308 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PCDH12Q9NPG4 1184 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 GIT1Q9Y2X7 761 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 WWP2O00308 870 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PROCP04070 461 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ALOX12P18054 663 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 WARSP23381 471 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ATP5F1P24539 256 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PKNOX1P55347 436 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 DDI2Q5TDH0 399 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ADGRG2Q8IZP9 1017 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 TLR10Q9BXR5 811 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 BRD9Q9H8M2 597 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 POLE3Q9NRF9 147 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 CACNB4O00305 520 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PSMD10O75832 226 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ASGR1P07306 291 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 GTF2BQ00403 316 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 RHAGQ02094 409 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PTPRNQ16849 979 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 FAAH2Q6GMR7 532 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 KCNK18Q7Z418 384 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 OR10G6Q8NH81 332 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PRCCQ92733 491 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 NELL1Q92832 810 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 FAM198AQ9UFP1 575 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 CEP170BQ9Y4F5 1589 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 CXCL14O95715 111 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 DNTTP04053 509 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ADRB2P07550 413 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 H2AFXP16104 143 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 CNSTQ6PJW8 725 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 KRT74Q7RTS7 529 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 TMPRSS4Q9NRS4 437 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 PTCH2Q9Y6C5 1203 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ADH1CP00326 375 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 AP5B1Q2VPB7 878 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 NT5DC1Q5TFE4 455 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ARMC3Q5W041 872 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 RASAL3Q86YV0 1011 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 CLVS1Q8IUQ0 354 aaPredicted RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 RTL3Q8N8U3 475 aaKnown RBP18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 GPR156Q8NFN8 814 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 MTMR9Q96QG7 549 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 MCM8Q9UJA3 840 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 ZNF510Q9Y2H8 683 aa18.31■□□□□ 0.52
SFSWAP-203ENST00000535236 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 LOC102724159A0A0B4J2E5 919 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 PRG2P13727 222 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 IDH2P48735 452 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 SQLEQ14534 574 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 PWP2Q15269 919 aaKnown RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 SDHAF4Q5VUM1 108 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 ZNF549Q6P9A3 640 aa18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 BHLHE22Q8NFJ8 381 aaPredicted RBP18.3■□□□□ 0.52
SFSWAP-203ENST00000535236 KAT5Q92993 513 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms