RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 TMCC1O94876 653 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 SERPINB6P35237 376 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 PEX6Q13608 980 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 DPYSL2Q16555 572 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 IGF2-ASQ6U949 168 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 CACUL1Q86Y37 369 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 FSTL5Q8N475 847 aaPredicted RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 CHST14Q8NCH0 376 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 NXPE2Q96DL1 559 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 NOL6Q9H6R4 1146 aaKnown RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 CNOT8Q9UFF9 292 aaKnown RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 ZFR2Q9UPR6 939 aaKnown RBP10.54□□□□□ -0.72
CSDE1-217ENST00000534699 SNX10Q9Y5X0 201 aa10.54□□□□□ -0.72
CSDE1-217ENST00000534699 PCDH8O95206 1070 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 FTLP02792 175 aaPredicted RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 KRT10P13645 584 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 PFN3P60673 137 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 RHOAP61586 193 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 ERAP2Q6P179 960 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 GCNT7Q6ZNI0 430 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 PARS2Q7L3T8 475 aaKnown RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 OR2I1PQ8NGU4 316 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CCDC86Q9H6F5 360 aaKnown RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 KLK13Q9UKR3 277 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 TEX33O43247 280 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 SOCS5O75159 536 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 TM7SF2O76062 418 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CSF2P04141 144 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CYP1A2P05177 515 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 NME1P15531 152 aaKnown RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 MAN1A1P33908 653 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 ACVRL1P37023 503 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 ARL4AP40617 200 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 RPIAP49247 311 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 FAM193AP78312 1265 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 FANCCQ00597 558 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 RTP5Q14D33 572 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CLPPQ16740 277 aaPredicted RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 SCYL2Q6P3W7 929 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 ZNF571Q7Z3V5 609 aaPredicted RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CHCHD4Q8N4Q1 142 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CXorf40AQ8TE69 158 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 CALR3Q96L12 384 aaKnown RBP10.53□□□□□ -0.72
CSDE1-217ENST00000534699 ZDHHC6Q9H6R6 413 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 UVRAGQ9P2Y5 699 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 SPASTQ9UBP0 616 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 LHX3Q9UBR4 397 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 SEPT3Q9UH03 358 aa10.53□□□□□ -0.72
CSDE1-217ENST00000534699 SPTY2D1-AS1A0A0U1RR47 76 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 FAM72CH0Y354 149 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 TMX2-CTNND1H3BSU7 103 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 K7ERQ8 282 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 DDX3XO00571 662 aaKnown RBP eCLIP10.52□□□□□ -0.726e-27■■■□□ 16.5
CSDE1-217ENST00000534699 SCAMP1O15126 338 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 PIAS2O75928 621 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 CKMT1AP12532 417 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 SERPINA4P29622 427 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 MTM1Q13496 603 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.72
CSDE1-217ENST00000534699 KCNT1Q5JUK3 1230 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 FAM72AQ5TYM5 149 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 FAM72DQ6L9T8 149 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 CAVIN1Q6NZI2 390 aaKnown RBP10.52□□□□□ -0.72
CSDE1-217ENST00000534699 LINGO4Q6UY18 593 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 RFX8Q6ZV50 586 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 SRLQ86TD4 932 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 PARGQ86W56 976 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 FAM72BQ86X60 149 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 ZNF653Q96CK0 615 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 ERLEC1Q96DZ1 483 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 CAMK1GQ96NX5 476 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 SUV39H2Q9H5I1 410 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 ATP13A3Q9H7F0 1226 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 DNAI1Q9UI46 699 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 ZMIZ1Q9ULJ6 1067 aa10.52□□□□□ -0.72
CSDE1-217ENST00000534699 FCF1Q9Y324 198 aaKnown RBP10.52□□□□□ -0.72
CSDE1-217ENST00000534699 NUMA1Q14980 2115 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 SSU72P8A0A1W2PR75 194 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 PSMD11O00231 422 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 PYGLP06737 847 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 ATXN1LP0C7T5 689 aaKnown RBP10.52□□□□□ -0.73
CSDE1-217ENST00000534699 XPAP23025 273 aaPredicted RBP10.52□□□□□ -0.73
CSDE1-217ENST00000534699 KELP23276 732 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 GGCXP38435 758 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 UBASH3AP57075 661 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 RPL7AP62424 266 aaKnown RBP10.52□□□□□ -0.73
CSDE1-217ENST00000534699 DPYSQ14117 519 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 TCEAL1Q15170 157 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 CYTH1Q15438 398 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 ZCCHC8Q6NZY4 707 aaKnown RBP10.52□□□□□ -0.73
CSDE1-217ENST00000534699 MACC1Q6ZN28 852 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 NLRP8Q86W28 1048 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 PROSER1Q86XN7 944 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 LSMEM2Q8N112 164 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 NDUFAF2Q8N183 169 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 NSMCE1Q8WV22 266 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 ECHDC3Q96DC8 303 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 SNRNP25Q9BV90 132 aaKnown RBP10.52□□□□□ -0.73
CSDE1-217ENST00000534699 TNKS2Q9H2K2 1166 aa10.52□□□□□ -0.73
CSDE1-217ENST00000534699 LUC7L2Q9Y383 392 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms