RNA–Protein interactions for RNA: ENST00000534086.1

AP003555.3-201, humanhuman

TSL 4 BASIC

Gene AP003555.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.3-201ENST00000534086 SRRM3A6NNA2 597 aaPredicted RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 A6NNZ2 444 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 EIF3CLB5ME19 914 aaKnown RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 EEF2KO00418 725 aaKnown RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 DAPK3O43293 454 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 C1SP09871 688 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 NDST2P52849 883 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 FANCCQ00597 558 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 SMAD1Q15797 465 aaKnown RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 CA9Q16790 459 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 TTC7BQ86TV6 843 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 LUZP1Q86V48 1076 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 DCP2Q8IU60 420 aaKnown RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 ARFGAP1Q8N6T3 406 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 FNIP1Q8TF40 1166 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 VOPP1Q96AW1 172 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 ZNF653Q96CK0 615 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 ARHGEF26Q96DR7 871 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 TRIM11Q96F44 468 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 BMFQ96LC9 184 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 EIF3CQ99613 913 aaKnown RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 SNRNP25Q9BV90 132 aaKnown RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 C1QTNF2Q9BXJ5 285 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 TRIM7Q9C029 511 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 LRRC19Q9H756 370 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 MYO1AQ9UBC5 1043 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 UBA2Q9UBT2 640 aaPredicted RBP18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 MFHAS1Q9Y4C4 1052 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 SCINQ9Y6U3 715 aa18.01■□□□□ 0.47
AP003555.3-201ENST00000534086 POM121BA6NF01 834 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 PRPSAP2O60256 369 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 RFPL3O75679 317 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 CAPNS1P04632 268 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 MYBL1P10243 752 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 CDK4P11802 303 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 DGKAP23743 735 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 MIPP30301 263 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 UBASH3AP57075 661 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 CYTH1Q15438 398 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 PTAR1Q7Z6K3 402 aaPredicted RBP18■□□□□ 0.47
AP003555.3-201ENST00000534086 MARCH9Q86YJ5 346 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 SLC25A45Q8N413 288 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 TSC1Q92574 1164 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 CELF6Q96J87 481 aaKnown RBP18■□□□□ 0.47
AP003555.3-201ENST00000534086 LENG8Q96PV6 779 aaPredicted RBP18■□□□□ 0.47
AP003555.3-201ENST00000534086 PEBP4Q96S96 227 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 ISCUQ9H1K1 167 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 CCDC86Q9H6F5 360 aaKnown RBP18■□□□□ 0.47
AP003555.3-201ENST00000534086 MRPL47Q9HD33 250 aaKnown RBP18■□□□□ 0.47
AP003555.3-201ENST00000534086 GGT7Q9UJ14 662 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 ITM2BQ9Y287 266 aa18■□□□□ 0.47
AP003555.3-201ENST00000534086 GOLGA4Q13439 2230 aaKnown RBP18■□□□□ 0.47
AP003555.3-201ENST00000534086 FAM149AA5PLN7 773 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 J3KR12 359 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 FPGTO14772 594 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 RAD51BO15315 384 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 CKMT2P17540 419 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 ACADVLP49748 655 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 TDRD12Q587J7 1177 aaKnown RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 KYAT3Q6YP21 454 aaKnown RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 TMPRSS12Q86WS5 348 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 SLC22A18ASQ8N1D0 253 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 ASB12Q8WXK4 309 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 IFT43Q96FT9 208 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 KCTD15Q96SI1 283 aaPredicted RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 NCAPGQ9BPX3 1015 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 CPEB1Q9BZB8 566 aaKnown RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 SLC39A8Q9C0K1 460 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 DKK3Q9UBP4 350 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 LHX3Q9UBR4 397 aa17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 BZW2Q9Y6E2 419 aaKnown RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 ARID1BQ8NFD5 2236 aaPredicted RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 TDRD6O60522 2096 aaKnown RBP17.99■□□□□ 0.47
AP003555.3-201ENST00000534086 A0A1W2PQJ5 194 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 GOLGA6L19H0YKK7 550 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 TAF4O00268 1085 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 AREL1O15033 823 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 INSIG1O15503 277 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 SPINT1O43278 529 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 SIGLEC6O43699 453 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PRAMEF11O60813 436 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PIAS2O75928 621 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 RABIFP47224 123 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PAPOLAP51003 745 aaKnown RBP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 ZNF211Q13398 564 aaPredicted RBP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 HS1BP3Q53T59 392 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 LRRC73Q5JTD7 316 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 RFX8Q6ZV50 586 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PROSER1Q86XN7 944 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PSTKQ8IV42 348 aaKnown RBP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 SYN2Q92777 582 aaPredicted RBP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 EXOC2Q96KP1 924 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 KLF6Q99612 283 aaPredicted RBP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 PDFQ9HBH1 243 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 UCKL1Q9NWZ5 548 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 DNAJC28Q9NX36 388 aa17.98■□□□□ 0.47
AP003555.3-201ENST00000534086 IPO11Q9UI26 975 aaKnown RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms