RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 ATL1Q8WXF7 558 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 METTL2AQ96IZ6 378 aaKnown RBP4.09□□□□□ -1.76
SOX6-217ENST00000533870 NODALQ96S42 347 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 CYP2S1Q96SQ9 504 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 DCUN1D5Q9BTE7 237 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 CLEC4MQ9H2X3 399 aaPredicted RBP4.09□□□□□ -1.76
SOX6-217ENST00000533870 NOL6Q9H6R4 1146 aaKnown RBP4.09□□□□□ -1.76
SOX6-217ENST00000533870 USP29Q9HBJ7 922 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 XPR1Q9UBH6 696 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 CSADQ9Y600 493 aa4.09□□□□□ -1.76
SOX6-217ENST00000533870 COL1A1P02452 1464 aaPredicted RBP4.09□□□□□ -1.76
SOX6-217ENST00000533870 SPDYE5A6NIY4 337 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 LYPLA1O75608 230 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 AP2A1O95782 977 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 KITP10721 976 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ITGALP20701 1170 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 FPR1P21462 350 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 AQP4P55087 323 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 LCN8Q6JVE9 175 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 PLET1Q6UQ28 207 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 DDIASQ8IXT1 998 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MINDY1Q8N5J2 469 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 EMC1Q8N766 993 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 RNF149Q8NC42 400 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 OR2T12Q8NG77 320 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 KAT5Q92993 513 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CPB2Q96IY4 423 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 PPP1R10Q96QC0 940 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 COQ7Q99807 217 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 KCTD14Q9BQ13 255 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 GON7Q9BXV9 100 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SHCBP1LQ9BZQ2 653 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 NUAK2Q9H093 628 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 INTS10Q9NVR2 710 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 IMPAD1Q9NX62 359 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 NKX1-2Q9UD57 310 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 IFT52Q9Y366 437 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 hCG_2014768A0A024R1R8 64 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SLC15A5A6NIM6 579 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 HTRA2O43464 458 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 ALDH1A2O94788 518 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CDH1P12830 882 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 RELAQ04206 551 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 PTPN20Q4JDL3 420 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MDH1BQ5I0G3 518 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ZNF470Q6ECI4 717 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TMEM53Q6P2H8 277 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TREML1Q86YW5 311 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CCDC103Q8IW40 242 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CCDC36Q8IYA8 594 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 GJD3Q8N144 294 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 APPL2Q8NEU8 664 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MYO19Q96H55 970 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CRELD1Q96HD1 420 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 HPDLQ96IR7 371 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 LRRC3Q9BY71 257 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SP140LQ9H930 580 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SMURF2Q9HAU4 748 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 NECTIN3Q9NQS3 549 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 RAD18Q9NS91 495 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 STK32BQ9NY57 414 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SLIT2O94813 1529 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 C2CD4BA6NLJ0 364 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 NFIBO00712 420 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CFL1P23528 166 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 MATKP42679 507 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 LHX1P48742 406 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SLC5A3P53794 718 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 OXCT1P55809 520 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 APOFQ13790 326 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 NCF4Q15080 339 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MEX3CQ5U5Q3 659 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 MBLAC2Q68D91 279 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MZT2AQ6P582 158 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 INTS5Q6P9B9 1019 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 TMEM26Q6ZUK4 368 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CUZD1Q86UP6 607 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 HEATR4Q86WZ0 1026 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 HPS6Q86YV9 775 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MMAAQ8IVH4 418 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 FBXO39Q8N4B4 442 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 CBR4Q8N4T8 237 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ZNF276Q8N554 614 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 OR5K1Q8NHB7 308 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 ADAMTS16Q8TE57 1224 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 MYLPFQ96A32 169 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 C18orf25Q96B23 403 aaPredicted RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 VMP1Q96GC9 406 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 C12orf42Q96LP6 360 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SERPINB11Q96P15 392 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 AGAP3Q96P47 875 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 GPR22Q99680 433 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 FTHL17Q9BXU8 183 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 SLC29A3Q9BZD2 475 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 TMEM245Q9H330 911 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 PRSS51A0A1B0GVH4 220 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 EFCAB10A6NFE3 127 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 RGS10O43665 173 aa4.08□□□□□ -1.76
SOX6-217ENST00000533870 BUD23O43709 281 aaKnown RBP4.08□□□□□ -1.76
SOX6-217ENST00000533870 ARP10275 920 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms