RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 XPAP23025 273 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-225ENST00000533704 OVGP1Q12889 678 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 DNAJC3Q13217 504 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 SGCGQ13326 291 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 SERINC3Q13530 473 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 ZSCAN23Q3MJ62 389 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 FIGNQ5HY92 759 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 DHRS13Q6UX07 377 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 GDPD4Q6W3E5 623 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 GCNT7Q6ZNI0 430 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 TTC7BQ86TV6 843 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 PLPP6Q8IY26 295 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 UMODL1-AS1Q8N2C9 162 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 PAF1Q8N7H5 531 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 TMEM145Q8NBT3 493 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 CASKIN2Q8WXE0 1202 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
CAPN1-225ENST00000533704 OSBPL1AQ9BXW6 950 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 SLC17A9Q9BYT1 436 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 ZWILCHQ9H900 591 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 ERVMER34-1Q9H9K5 563 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 SP110Q9HB58 689 aa10.59□□□□□ -0.71
CAPN1-225ENST00000533704 MRPL47Q9HD33 250 aaKnown RBP10.59□□□□□ -0.71
CAPN1-225ENST00000533704 CXorf51AA0A1B0GTR3 108 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 FAM149AA5PLN7 773 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 TMEM8BA6NDV4 472 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 ARHGAP42A6NI28 874 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 A6NNZ2 444 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 J3KR12 359 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 RAD51BO15315 384 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 FFAR2O15552 330 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 TSPAN6O43657 245 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 AP1G1O43747 822 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 LRCH4O75427 683 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 PIGNO95427 931 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 SERPING1P05155 500 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 ITIH2P19823 946 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 HTR7P34969 479 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 PBX1P40424 430 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 SSR1P43307 286 aaKnown RBP10.58□□□□□ -0.72
CAPN1-225ENST00000533704 RXRGP48443 463 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 PAPOLAP51003 745 aaKnown RBP10.58□□□□□ -0.72
CAPN1-225ENST00000533704 ZBED6P86452 979 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 FGL2Q14314 439 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 CYTH1Q15438 398 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 SMTNL2Q2TAL5 461 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 TMEM259Q4ZIN3 620 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 INO80DQ53TQ3 878 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-225ENST00000533704 ZNF542PQ5EBM4 170 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 CFAP58Q5T655 872 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 Q6ZSR6 202 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 RFX8Q6ZV50 586 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 CXorf40AQ8TE69 158 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 FNIP1Q8TF40 1166 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 HSPH1Q92598 858 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 RAB7BQ96AH8 199 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 LRIG1Q96JA1 1093 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 SLC39A8Q9C0K1 460 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 CAAP1Q9H8G2 361 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 DONSONQ9NYP3 566 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 LHX3Q9UBR4 397 aa10.58□□□□□ -0.72
CAPN1-225ENST00000533704 IPO11Q9UI26 975 aaKnown RBP10.58□□□□□ -0.72
CAPN1-225ENST00000533704 LUC7L2Q9Y383 392 aaKnown RBP10.58□□□□□ -0.72
CAPN1-225ENST00000533704 ANKRD11Q6UB99 2663 aaPredicted RBP10.58□□□□□ -0.72
CAPN1-225ENST00000533704 APC2O95996 2303 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 A0A1W2PQJ5 194 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 POM121BA6NF01 834 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 EIF3CLB5ME19 914 aaKnown RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 H3BRJ5 948 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 FPGTO14772 594 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 PRAMEF11O60813 436 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 MMP20O60882 483 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 RFPL3O75679 317 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 ERCC2P18074 760 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 NDST2P52849 883 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 CLDN6P56747 220 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 HS1BP3Q53T59 392 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 HGSNATQ68CP4 663 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 CCNI2Q6ZMN8 369 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 TMPRSS7Q7RTY8 843 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 ABI3BPQ7Z7G0 1075 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 SLC22A18ASQ8N1D0 253 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 KDF1Q8NAX2 398 aaPredicted RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 ARHGEF26Q96DR7 871 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 BTBD6Q96KE9 485 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 BMFQ96LC9 184 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 EIF3CQ99613 913 aaKnown RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 WRAP53Q9BUR4 548 aaKnown RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 NUP85Q9BW27 656 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 XPO4Q9C0E2 1151 aaKnown RBP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 THAP2Q9H0W7 228 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 ISCUQ9H1K1 167 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 LRRC19Q9H756 370 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.57□□□□□ -0.72
CAPN1-225ENST00000533704 KLHL11Q9NVR0 708 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 DNAJC28Q9NX36 388 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 ANAPC7Q9UJX3 599 aa10.57□□□□□ -0.72
CAPN1-225ENST00000533704 CAPN11Q9UMQ6 739 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms