RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 RPP40O75818 363 aaKnown RBP16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 HLA-DQB2P05538 268 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 ITGB7P26010 798 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 RBL1P28749 1068 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 CD6P30203 668 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 GKP32189 559 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 DRD3P35462 400 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 MAXP61244 160 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 WASHC5Q12768 1159 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 SIX1Q15475 284 aaPredicted RBP16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 LONRF2Q1L5Z9 754 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 ZNF805Q5CZA5 627 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 DARS2Q6PI48 645 aaKnown RBP16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 SLC36A4Q6YBV0 504 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 CACUL1Q86Y37 369 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 HDDC3Q8N4P3 179 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 ACTRT1Q8TDG2 376 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 RLN3Q8WXF3 142 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 ARRDC3Q96B67 414 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 TEKT5Q96M29 485 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 NAP1L3Q99457 506 aaPredicted RBP16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 OMDQ99983 421 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 SUV39H2Q9H5I1 410 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 ATP13A3Q9H7F0 1226 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 SGK2Q9HBY8 427 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 SCUBE2Q9NQ36 999 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 DYRK4Q9NR20 520 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 HOMER3Q9NSC5 361 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 WSB2Q9NYS7 404 aaPredicted RBP16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 SEPT10Q9P0V9 454 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 DKK3Q9UBP4 350 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 CYP8B1Q9UNU6 501 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 ARIH1Q9Y4X5 557 aaPredicted RBP16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 CACNA1HO95180 2353 aa16.65■□□□□ 0.26
PACSIN3-210ENST00000533686 A0A1W2PP55 124 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 RNF103O00237 685 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 RNASEH2AO75792 299 aaKnown RBP16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 UGT2B4P06133 528 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 SERPINA4P29622 427 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 METAP1P53582 386 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 BCL2L1Q07817 233 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 ITKQ08881 620 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 CCNG2Q16589 344 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 DRICH1Q6PGQ1 229 aaPredicted RBP16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 NYAP1Q6ZVC0 841 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 ERN2Q76MJ5 926 aaKnown RBP16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 ARRDC2Q8TBH0 407 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 GANCQ8TET4 914 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 COG1Q8WTW3 980 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 SPOCK2Q92563 424 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 NKD2Q969F2 451 aaPredicted RBP16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 KLHL32Q96NJ5 620 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 SEMA3CQ99985 751 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 FAM118BQ9BPY3 351 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 BTBD1Q9H0C5 482 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 NEUROG2Q9H2A3 272 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 USP29Q9HBJ7 922 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 NOD2Q9HC29 1040 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 CD93Q9NPY3 652 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 TRHDEQ9UKU6 1024 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 DNPEPQ9ULA0 475 aa16.64■□□□□ 0.25
PACSIN3-210ENST00000533686 A0A1W2PQ67 120 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 TSPAN11A1L157 253 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 CFAP69A5D8W1 941 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 C16orf96A6NNT2 1141 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 TRAFD1O14545 582 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 LIASO43766 372 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 SOCS5O75159 536 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 GJB3O75712 270 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 PIGNO95427 931 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 CNTN1Q12860 1018 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 OASLQ15646 514 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 SPDYCQ5MJ68 293 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 BRAT1Q6PJG6 821 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 ADAT2Q7Z6V5 191 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 ATOH1Q92858 354 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 ECHDC3Q96DC8 303 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 TOE1Q96GM8 510 aaKnown RBP16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 NSMCE3Q96MG7 304 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 AGAP3Q96P47 875 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 SLC25A51Q9H1U9 297 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 KDM4CQ9H3R0 1056 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 GLOD4Q9HC38 313 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 SERGEFQ9UGK8 458 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 MBD1Q9UIS9 605 aaPredicted RBP16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 INVSQ9Y283 1065 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 SAR1BQ9Y6B6 198 aa16.63■□□□□ 0.25
PACSIN3-210ENST00000533686 TTC24A2A3L6 582 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 C5orf60A6NFR6 353 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 PGRMC1O00264 195 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 FANCGO15287 622 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 KCNN4O15554 427 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 HTRA2O43464 458 aaPredicted RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 STK10O94804 968 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 TUBB4AP04350 444 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 SERPINF2P08697 491 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 CASQ1P31415 396 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 STIP1P31948 543 aaKnown RBP16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 SUOXP51687 545 aa16.62■□□□□ 0.25
PACSIN3-210ENST00000533686 NEK3P51956 506 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms